RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PRR27Q6MZM9 219 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 MFSD12Q6NUT3 480 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 MED27Q6P2C8 311 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 WDR73Q6P4I2 378 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 CRIP3Q6Q6R5 217 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 RAD9BQ6WBX8 426 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 DNM1P46Q6ZS02 220 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 TMPRSS11FQ6ZWK6 438 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 BTN2A1Q7KYR7 527 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 ZNF550Q7Z398 422 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 ADAMTSL2Q86TH1 951 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 EXOC3L1Q86VI1 746 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 LDLRAD3Q86YD5 345 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 MED12LQ86YW9 2145 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 ZCCHC7Q8N3Z6 543 aaKnown RBP5.34□□□□□ -1.55
CPSF7-222ENST00000544585 C1orf52Q8N6N3 182 aaKnown RBP5.34□□□□□ -1.55
CPSF7-222ENST00000544585 TEX9Q8N6V9 391 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 ZNF615Q8N8J6 731 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 GBP7Q8N8V2 638 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-222ENST00000544585 RDH11Q8TC12 318 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 DOK4Q8TEW6 326 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 OIT3Q8WWZ8 545 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 TXNDC15Q96J42 360 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 MTERF1Q99551 399 aaKnown RBP5.34□□□□□ -1.55
CPSF7-222ENST00000544585 TMEM204Q9BSN7 226 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 SPXQ9BT56 116 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 LMF2Q9BU23 707 aaKnown RBP5.34□□□□□ -1.55
CPSF7-222ENST00000544585 C19orf24Q9BVV8 132 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 OSBPL11Q9BXB4 747 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 PRSS22Q9GZN4 317 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 SHARPINQ9H0F6 387 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 OPN3Q9H1Y3 402 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-222ENST00000544585 CXorf21Q9HAI6 301 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 NGBQ9NPG2 151 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 PPANQ9NQ55 473 aaKnown RBP5.34□□□□□ -1.55
CPSF7-222ENST00000544585 LYARQ9NX58 379 aaKnown RBP5.34□□□□□ -1.55
CPSF7-222ENST00000544585 KLRF1Q9NZS2 232 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 IKZF3Q9UKT9 509 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 WIF1Q9Y5W5 379 aa5.34□□□□□ -1.55
CPSF7-222ENST00000544585 VPS13CQ709C8 3753 aa5.34□□□□□ -1.56
CPSF7-222ENST00000544585 MXRA5Q9NR99 2828 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 MED12Q93074 2177 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 NCKAP5O14513 1909 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.33□□□□□ -1.561e-7■■■□□ 17.2
CPSF7-222ENST00000544585 ZANQ9Y493 2812 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 PRSS51A0A1B0GVH4 220 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 hDV102S1A0JD36 115 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 OR2M5A3KFT3 312 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 ACOX3O15254 700 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 TAPBPO15533 448 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 SELENOFO60613 162 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 CH25HO95992 272 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 CLPSP04118 112 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 CD22P20273 847 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 DRD5P21918 477 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 ACVR1BP36896 505 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 PTGDSP41222 190 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 XKP51811 444 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 RAP1GDS1P52306 607 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 NUDT6P53370 316 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 MAPK12P53778 367 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 DSCR4P56555 118 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-222ENST00000544585 TNFRSF17Q02223 184 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 PTGR1Q14914 329 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 PDK4Q16654 411 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 C18orf21Q32NC0 220 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-222ENST00000544585 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 CYB5R2Q6BCY4 276 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 ETFRF1Q6IPR1 90 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 PLXDC2Q6UX71 529 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 ADGRG3Q86Y34 549 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 OR4K14Q8NGD5 310 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 ST7LQ8TDW4 575 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 SMAP2Q8WU79 429 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-222ENST00000544585 HGDQ93099 445 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 CERS2Q96G23 380 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 ZNF582Q96NG8 517 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-222ENST00000544585 TNFRSF13CQ96RJ3 184 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 NODALQ96S42 347 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 PIGQQ9BRB3 760 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 OR51B5Q9H339 312 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 TSPY26PQ9H489 355 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 DDX31Q9H8H2 851 aaKnown RBP5.33□□□□□ -1.56
CPSF7-222ENST00000544585 RNF122Q9H9V4 155 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 POPDC3Q9HBV1 291 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 GUCA1BQ9UMX6 200 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 ZNF175Q9Y473 711 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 ALPK2Q86TB3 2170 aa5.33□□□□□ -1.56
CPSF7-222ENST00000544585 UQCRHLA0A096LP55 91 aa5.32□□□□□ -1.56
CPSF7-222ENST00000544585 IGHV4-28A0A0C4DH34 117 aa5.32□□□□□ -1.56
CPSF7-222ENST00000544585 A0A1W2PP18 115 aa5.32□□□□□ -1.56
CPSF7-222ENST00000544585 NCF1BA6NI72 391 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-222ENST00000544585 WASHC1A8K0Z3 465 aa5.32□□□□□ -1.56
CPSF7-222ENST00000544585 NCF1CA8MVU1 366 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-222ENST00000544585 GPRIN2O60269 458 aa5.32□□□□□ -1.56
CPSF7-222ENST00000544585 LMX1BO60663 402 aa5.32□□□□□ -1.56
CPSF7-222ENST00000544585 FZD7O75084 574 aa5.32□□□□□ -1.56
CPSF7-222ENST00000544585 SH3BGRLO75368 114 aa5.32□□□□□ -1.56
CPSF7-222ENST00000544585 REM1O75628 298 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms