RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 GALK2Q01415 458 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ROR2Q01974 943 aaKnown RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 POU3F1Q03052 451 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 PLP2Q04941 152 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 GABRA6Q16445 453 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 MOGQ16653 247 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 DUSP7Q16829 419 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 LRRC23Q53EV4 343 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 Q5PR19 223 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 TSPO2Q5TGU0 170 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 GKAP1Q5VSY0 366 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SEZ6L2Q6UXD5 910 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 DEF8Q6ZN54 512 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 PIWIL3Q7Z3Z3 882 aaKnown RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 YTHDF3Q7Z739 585 aaKnown RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 RETREG3Q86VR2 466 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 CARM1Q86X55 608 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 PTOV1Q86YD1 416 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 C1orf174Q8IYL3 243 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 MUC15Q8N387 334 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF540Q8NDQ6 660 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 OR6T1Q8NGN1 323 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 OR1J2Q8NGS2 313 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 OR6X1Q8NH79 312 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 VANGL1Q8TAA9 524 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF417Q8TAU3 575 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 TAAR8Q969N4 342 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF566Q969W8 418 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 FAM162AQ96A26 154 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 RCN3Q96D15 328 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 KTI12Q96EK9 354 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SGTBQ96EQ0 304 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC25A44Q96H78 314 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 C18orf12Q96KH6 178 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC38A2Q96QD8 506 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 RBP7Q96R05 134 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF587Q96SQ5 575 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ELAC2Q9BQ52 826 aaKnown RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 RHNO1Q9BSD3 238 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 TMEM204Q9BSN7 226 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 KATNB1Q9BVA0 655 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ULBP2Q9BZM5 246 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 MYOZ1Q9NP98 299 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC17A5Q9NRA2 495 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC7A10Q9NS82 523 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF446Q9NWS9 450 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ADA2Q9NZK5 511 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 PRSS50Q9UI38 385 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ING1Q9UK53 422 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC7A7Q9UM01 511 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 TMEM5Q9Y2B1 443 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ARL2BPQ9Y2Y0 163 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC25A15Q9Y619 301 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ATP23Q9Y6H3 246 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 MXRA5Q9NR99 2828 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 CUBNO60494 3623 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ARPC4-TTLL3A0A0A6YYG9 625 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 A6NIZ1 184 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 FTCDNL1E5RQL4 147 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 BLOC1S5-TXNDC5H3BN57 136 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 M0R3H8 397 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PDLIM1O00151 329 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CXCR6O00574 342 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 FBP2O00757 339 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PLPP3O14495 311 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 XKRYO14609 159 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 TPST1O60507 370 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 FZD7O75084 574 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 SERPINI2O75830 405 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PDE5AO76074 875 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 UBL3O95164 117 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF682O95780 498 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CH25HO95992 272 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 BGLAPP02818 100 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 MT-ND5P03915 603 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ITGA5P08648 1049 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 SAGP10523 405 aaPredicted RBP4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CD79AP11912 226 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 NPR2P20594 1047 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 HTR2AP28223 471 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC9A3P48764 834 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PTH2RP49190 550 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF83P51522 516 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 RAP1BP61224 184 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PCBD1P61457 104 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 RAP1AP62834 184 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ADAM8P78325 824 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PPP2R2BQ00005 443 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 LIPEQ05469 1076 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ZP4Q12836 540 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 FOXD4Q12950 439 aaPredicted RBP4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CAMK2DQ13557 499 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 TRAM2Q15035 370 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC36A2Q495M3 483 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 NRN1LQ496H8 165 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 IFI44LQ53G44 452 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CYBRD1Q53TN4 286 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 MTX3Q5HYI7 312 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 RABL3Q5HYI8 236 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 SAMD4BQ5PRF9 694 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms