RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ZNF347Q96SE7 839 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 RASSF1Q9NS23 344 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 PDZD2O15018 2839 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 NPIPB13A6NJU9 1138 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 AQP12BA6NM10 295 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 NPIPB4C9JG80 1138 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 UPK3AO75631 287 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 HRGP04196 525 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 HIST1H2ABP04908 130 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 IL32P24001 234 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 OMPP47874 163 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 RASSF2P50749 326 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 KRTAP10-9P60411 292 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 FOXD4Q12950 439 aaPredicted RBP16.82■□□□□ 0.28
DDX55-211ENST00000544429 TAB1Q15750 504 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 GABRA6Q16445 453 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 HIST3H2AQ7L7L0 130 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 P2RY8Q86VZ1 359 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 AQP12AQ8IXF9 295 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 C1orf162Q8NEQ5 155 aaPredicted RBP16.82■□□□□ 0.28
DDX55-211ENST00000544429 HIST1H2ACQ93077 130 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 SEPHS2Q99611 448 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 LRMDAQ9H2I8 198 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 MED29Q9NX70 200 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 ZNF226Q9NYT6 803 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 UPB1Q9UBR1 384 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 SLC7A8Q9UHI5 535 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 POMPQ9Y244 141 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 NAV2Q8IVL1 2488 aa16.82■□□□□ 0.28
DDX55-211ENST00000544429 LRBAP50851 2863 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 SH3PXD2BA1X283 911 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 SLC35F4A4IF30 521 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 OR5H1A6NKK0 313 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 C11orf98E9PRG8 122 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 CDC42EP2O14613 210 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 KLF4O43474 513 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 AKAP8O43823 692 aaKnown RBP16.81■□□□□ 0.28
DDX55-211ENST00000544429 SLC43A1O75387 559 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 OR6A2O95222 327 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 UMPSP11172 480 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 IFNGR1P15260 489 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 AHCYP23526 432 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 DNAJA1P31689 397 aaKnown RBP16.81■□□□□ 0.28
DDX55-211ENST00000544429 AQP2P41181 271 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 SMIM11AP58511 58 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 ANKDD1AQ495B1 522 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 TIMM23BQ5SRD1 257 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 C20orf196Q8IYI0 205 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 ADGRG5Q8IZF4 528 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 LRRC75AQ8NAA5 344 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 OR4K5Q8NGD3 323 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 OR6X1Q8NH79 312 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 HSD17B8Q92506 261 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 ADAD1Q96M93 576 aaKnown RBP16.81■□□□□ 0.28
DDX55-211ENST00000544429 ALKBH3Q96Q83 286 aaPredicted RBP16.81■□□□□ 0.28
DDX55-211ENST00000544429 EMC6Q9BV81 110 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 TMEM5Q9Y2B1 443 aa16.81■□□□□ 0.28
DDX55-211ENST00000544429 SPG11Q96JI7 2443 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 BLOC1S5-TXNDC5H3BN57 136 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 RNF13O43567 381 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 GADD45GO95257 159 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 ZNF26P17031 533 aaPredicted RBP16.8■□□□□ 0.28
DDX55-211ENST00000544429 SLC9A3P48764 834 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 IL1RL1Q01638 556 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 LAPTM4AQ15012 233 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 FGD3Q5JSP0 725 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 PHYHD1Q5SRE7 291 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 C1QTNF12Q5T7M4 302 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 OR7E24Q6IFN5 339 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 SLC35D2Q76EJ3 337 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 ABHD12BQ7Z5M8 362 aaPredicted RBP16.8■□□□□ 0.28
DDX55-211ENST00000544429 MEX3DQ86XN8 651 aaKnown RBP16.8■□□□□ 0.28
DDX55-211ENST00000544429 MOSPD2Q8NHP6 518 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 MMADHCQ9H3L0 296 aaPredicted RBP16.8■□□□□ 0.28
DDX55-211ENST00000544429 POLQO75417 2590 aa16.8■□□□□ 0.28
DDX55-211ENST00000544429 MAST4O15021 2626 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 CSMD1Q96PZ7 3565 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 RAI1Q7Z5J4 1906 aaPredicted RBP16.79■□□□□ 0.28
DDX55-211ENST00000544429 A0A1W2PPR1 153 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 TCRBV3S1A0A5B6 114 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 EFCAB9A8MZ26 197 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 ZNF587BE7ETH6 402 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 CASKO14936 926 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 RAD51DO75771 328 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 KRT36O76013 467 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 IGHMP01871 453 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 RAP2AP10114 183 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 RRM2P31350 389 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 GPR4P46093 362 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 SPIBQ01892 262 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 HIST3H3Q16695 136 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 FAM98BQ52LJ0 330 aaKnown RBP16.79■□□□□ 0.28
DDX55-211ENST00000544429 ASRGL1Q7L266 308 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 SSX8Q7RTT4 187 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 C17orf78Q8N4C9 275 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 OR4C15Q8NGM1 316 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 OR52J3Q8NH60 311 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 ZC3HAV1LQ96H79 300 aaKnown RBP16.79■□□□□ 0.28
DDX55-211ENST00000544429 LURAP1Q96LR2 239 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 TRIM15Q9C019 465 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms