RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 CALHM1Q8IU99 346 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 OR2A12Q8NGT7 310 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 C1orf216Q8TAB5 229 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 APH1BQ8WW43 257 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 APH1AQ96BI3 265 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 CPB2Q96IY4 423 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 SIGLEC10Q96LC7 697 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF701Q9NV72 531 aaPredicted RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 OPTCQ9UBM4 332 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 RAB36O95755 333 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 CST2P09228 141 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 GABRR2P28476 465 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 GDNFP39905 211 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 SELENOTP62341 195 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 TAF9Q16594 264 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 LCN8Q6JVE9 175 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 CLEC14AQ86T13 490 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 Q8N402 240 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 SPRYD4Q8WW59 207 aaPredicted RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 SMARCD2Q92925 531 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 SDHCQ99643 169 aaPredicted RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 SLC25A32Q9H2D1 315 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 CST9LQ9H4G1 147 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 RPS10P5Q9NQ39 176 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 NLKQ9UBE8 527 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 NXT1Q9UKK6 140 aaKnown RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 RAB22AQ9UL26 194 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 OAZ3Q9UMX2 235 aa8.17□□□□□ -1.1
VPS13D-212ENST00000543766 ZFC3H1O60293 1989 aaKnown RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 CHD3Q12873 2000 aaKnown RBP8.17□□□□□ -1.1
VPS13D-212ENST00000543766 FNDC1Q4ZHG4 1894 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 TCRBV5S2A0A599 114 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF850A8MQ14 1090 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 RFXANKO14593 260 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 OR2T1O43869 369 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 PRSS23O95084 383 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 CST4P01036 141 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 GABRR1P24046 479 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 SLC6A11P48066 632 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 SLC25A11Q02978 314 aaKnown RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 FCN2Q15485 313 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ZXDCQ2QGD7 858 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 UNC50Q53HI1 259 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 FFAR4Q5NUL3 377 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ACOT7LQ6ZUV0 252 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 OR51Q1Q8NH59 317 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 RNASEH2CQ8TDP1 164 aaKnown RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 SMAP2Q8WU79 429 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 MRPS24Q96EL2 167 aaKnown RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 TCTN2Q96GX1 697 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 PKMYT1Q99640 499 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 RSPO3Q9BXY4 272 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 METTL17Q9H7H0 456 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 FRRS1LQ9P0K9 344 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 FBXO7Q9Y3I1 522 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 HS3ST4Q9Y661 456 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 WDR90Q96KV7 1748 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 A0A0U1RQS6 177 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ANXA2P2A6NMY6 339 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 P2RY10O00398 339 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 FAM87AP0C7U9 286 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 RAP1BP61224 184 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 NTHL1P78549 312 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 PRKCDQ05655 676 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM115Q12893 351 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 OPCMLQ14982 345 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF684Q5T5D7 378 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 FAM102AQ5T9C2 384 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM205Q6UW68 189 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 CYP2R1Q6VVX0 501 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 OR5AK3PQ8NH89 298 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ADAMTS17Q8TE56 1095 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 GPR137Q96N19 417 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 XYLT2Q9H1B5 865 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 NELFAQ9H3P2 528 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 DHX35Q9H5Z1 703 aaKnown RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 KIR3DX1Q9H7L2 352 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 PLEKHJ1Q9NW61 149 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ABI3Q9P2A4 366 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 A0A1W2PPC1 479 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 WNT9AO14904 365 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 TNFSF12O43508 249 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ACTL6BO94805 426 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 F11P03951 625 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 SRFP11831 508 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 FDXRP22570 491 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 UBE2MP61081 183 aaKnown RBP8.16□□□□□ -1.1
VPS13D-212ENST00000543766 CDH18Q13634 790 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 CYP51A1Q16850 503 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 PYCR3Q53H96 274 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 MFSD14BQ5SR56 506 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 FAM198BQ6UWH4 519 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM151AQ8N4L1 468 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 OR52B6Q8NGF0 335 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 OR1N2Q8NGR9 330 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 MUS81Q96NY9 551 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ANGPTL4Q9BY76 406 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 ULBP2Q9BZM5 246 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 PORCNQ9H237 461 aa8.16□□□□□ -1.1
VPS13D-212ENST00000543766 LPAR3Q9UBY5 353 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms