RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 IDH3GP51553 393 aaPredicted RBP11.4□□□□□ -0.58
RTN3-213ENST00000543552 TUBA1BP68363 451 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 TUBA4AP68366 448 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 POU3F1Q03052 451 aaPredicted RBP11.4□□□□□ -0.58
RTN3-213ENST00000543552 PUDPQ08623 228 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 RBBP4Q09028 425 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 PMS2P3Q13401 168 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 OR1Q1Q15612 314 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 CARTPTQ16568 116 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 MST1LQ2TV78 715 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 VHLLQ6RSH7 139 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 TUBA1AQ71U36 451 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 DHDDSQ86SQ9 333 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 LSRQ86X29 649 aaPredicted RBP11.4□□□□□ -0.58
RTN3-213ENST00000543552 SLC30A8Q8IWU4 369 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 C10orf53Q8N6V4 93 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 SLC41A3Q96GZ6 507 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 SORCS2Q96PQ0 1159 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 CPPED1Q9BRF8 314 aaPredicted RBP11.4□□□□□ -0.58
RTN3-213ENST00000543552 NELFAQ9H3P2 528 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 PLK3Q9H4B4 646 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 INTS9Q9NV88 658 aaKnown RBP11.4□□□□□ -0.58
RTN3-213ENST00000543552 MRPL39Q9NYK5 338 aaKnown RBP11.4□□□□□ -0.58
RTN3-213ENST00000543552 SEC14L4Q9UDX3 406 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 FBXL3Q9UKT7 428 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 SPEF1Q9Y4P9 236 aa11.4□□□□□ -0.58
RTN3-213ENST00000543552 ZNF726A6NNF4 738 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 RNF212BA8MTL3 300 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 HMGB1P1B2RPK0 211 aaPredicted RBP11.39□□□□□ -0.59
RTN3-213ENST00000543552 M0R3G1 203 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 TPST1O60507 370 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 OR6A2O95222 327 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 NPR2P20594 1047 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 HNF1AP20823 631 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 CBLP22681 906 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 NPRL3Q12980 569 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 GGTLC2Q14390 218 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 GLIPR1L2Q4G1C9 344 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 ARFGEF3Q5TH69 2177 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 ZNF613Q6PF04 617 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 PXKQ7Z7A4 578 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 C20orf196Q8IYI0 205 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 OR6N1Q8NGY5 312 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 TMEM158Q8WZ71 300 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 SIKE1Q9BRV8 207 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 SHARPINQ9H0F6 387 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 IKZF5Q9H5V7 419 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 DENND2DQ9H6A0 471 aaPredicted RBP11.39□□□□□ -0.59
RTN3-213ENST00000543552 DYNLRB1Q9NP97 96 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 SLC52A3Q9NQ40 469 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 POFUT2Q9Y2G5 429 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 NDUFAF1Q9Y375 327 aa11.39□□□□□ -0.59
RTN3-213ENST00000543552 IGHV2OR16-5A0A0B4J2B6 119 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 VWC2LB2RUY7 222 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 hCG_2039718K7EN88 272 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 CHP2O43745 196 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 LY6HO94772 140 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 MFN2O95140 757 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 BGLAPP02818 100 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 IGHV4-31P0DP07 118 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 APEHP13798 732 aaKnown RBP11.38□□□□□ -0.59
RTN3-213ENST00000543552 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
RTN3-213ENST00000543552 CALCRP30988 508 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 LSP1P33241 339 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 CDH12P55289 794 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 DAG1Q14118 895 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 ADRM1Q16186 407 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 GSG1Q2KHT4 349 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 IQCCQ4KMZ1 466 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 INTS11Q5TA45 600 aaKnown RBP11.38□□□□□ -0.59
RTN3-213ENST00000543552 CARD17Q5XLA6 110 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 DLEU7Q6UYE1 221 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 ZNF813Q6ZN06 617 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 ZNF627Q7L945 461 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 PATL1Q86TB9 770 aaKnown RBP11.38□□□□□ -0.59
RTN3-213ENST00000543552 MDP1Q86V88 176 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 COMTD1Q86VU5 262 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 C10orf111Q8N326 155 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 DPP10Q8N608 796 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 TSPEARQ8WU66 669 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 NEU4Q8WWR8 484 aaPredicted RBP11.38□□□□□ -0.59
RTN3-213ENST00000543552 RASSF5Q8WWW0 418 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 MCHR1Q99705 422 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
RTN3-213ENST00000543552 ULBP2Q9BZM5 246 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 MRGBPQ9NV56 204 aa11.38□□□□□ -0.59
RTN3-213ENST00000543552 SVEP1Q4LDE5 3571 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 SLC35F4A4IF30 521 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 MS4A18H0YCH9 400 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 LMX1BO60663 402 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 RAB36O95755 333 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 CELA3BP08861 270 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 CD79AP11912 226 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 AHCYP23526 432 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 THBS4P35443 961 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 CSNK1A1P48729 337 aa11.37□□□□□ -0.59
RTN3-213ENST00000543552 PCBP3P57721 371 aaKnown RBP11.37□□□□□ -0.59
RTN3-213ENST00000543552 RPS23P62266 143 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms