RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PRAMEF7Q5VXH5 474 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 MFSD12Q6NUT3 480 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 ADOQ96SZ5 270 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 NICN1Q9BSH3 213 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 APOOQ9BUR5 198 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF629Q9UEG4 869 aaPredicted RBP17.88■□□□□ 0.45
SUDS3-204ENST00000543473 C19orf25Q9UFG5 118 aaPredicted RBP17.88■□□□□ 0.45
SUDS3-204ENST00000543473 CBLCQ9ULV8 474 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 WASF3Q9UPY6 502 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF705GA8MUZ8 300 aaPredicted RBP17.88■□□□□ 0.45
SUDS3-204ENST00000543473 SOD1P00441 154 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 BDH1Q02338 343 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 HMGN3Q15651 99 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 RELL2Q8NC24 303 aaPredicted RBP17.88■□□□□ 0.45
SUDS3-204ENST00000543473 C10orf90Q96M02 699 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 SLC19A3Q9BZV2 496 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 SLC25A19Q9HC21 320 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 REV1Q9UBZ9 1251 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 KIF25Q9UIL4 384 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 DKKL1Q9UK85 242 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF593O00488 134 aaPredicted RBP17.88■□□□□ 0.45
SUDS3-204ENST00000543473 TANGO2Q6ICL3 276 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 UEVLDQ8IX04 471 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 ZFP82Q8N141 532 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 EPHX3Q9H6B9 360 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 FAM86C1Q9NVL1 165 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 SLC5A10A0PJK1 596 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 TUBAL3A6NHL2 446 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 TRAPPC6AO75865 159 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 IFNA10P01566 189 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 IFNA4P05014 189 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 FBLP22087 321 aaKnown RBP17.87■□□□□ 0.45
SUDS3-204ENST00000543473 HNRNPA2B1P22626 353 aaKnown RBP17.87■□□□□ 0.45
SUDS3-204ENST00000543473 HOXA9P31269 272 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 SLC22A25Q6T423 547 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF765Q7L2R6 523 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 MFSD9Q8NBP5 474 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 BBS1Q8NFJ9 593 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 BPNT1O95861 308 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 PEX11BO96011 259 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF43P17038 809 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 CD53P19397 219 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 DAP3P51398 398 aaKnown RBP17.87■□□□□ 0.45
SUDS3-204ENST00000543473 SSX1Q16384 188 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 TMEM240Q5SV17 173 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 LPCAT3Q6P1A2 487 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 Q6ZTK2 550 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 PRSS42Q7Z5A4 293 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 OR10Z1Q8NGY1 313 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 PFN4Q8NHR9 129 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 SLC22A8Q8TCC7 542 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 NINJ1Q92982 152 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 TSPAN10Q9H1Z9 355 aaPredicted RBP17.87■□□□□ 0.45
SUDS3-204ENST00000543473 SURF4O15260 269 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 PRPH2P23942 346 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 SNTB1Q13884 538 aaKnown RBP17.87■□□□□ 0.45
SUDS3-204ENST00000543473 PAN3Q58A45 887 aaKnown RBP17.87■□□□□ 0.45
SUDS3-204ENST00000543473 TMEM184AQ6ZMB5 413 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 LILRB2Q8N423 598 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 C2CD4CQ8TF44 421 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 SSX3Q99909 188 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 SCML1Q9UN30 329 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 C9J4A7 227 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 H3BML4 177 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 TP53I11O14683 189 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 CSNK1G2P78368 415 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 NIPAL3Q6P499 406 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 ABHD17CQ6PCB6 329 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 TMEM64Q6YI46 380 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 DPY19L2P2Q6ZN68 376 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 SLC41A2Q96JW4 573 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 NARFLQ9H6Q4 476 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 WDR76Q9H967 626 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 UBQLN4Q9NRR5 601 aa17.87■□□□□ 0.45
SUDS3-204ENST00000543473 A0A0B4J203 849 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 SELENOFO60613 162 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 CRYBB2P43320 205 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 SELENOIQ9C0D9 397 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 POFUT1Q9H488 388 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 ACOXLQ9NUZ1 547 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF175Q9Y473 711 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 A0A1B0GUH1 482 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 CCSO14618 274 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 PVRP15151 417 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 DDIT4LQ96D03 193 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 TIMM29Q9BSF4 260 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 SLC25A32Q9H2D1 315 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 CMC2Q9NRP2 79 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 DOCK1Q14185 1865 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 SPI1P17947 270 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 PXNP49023 591 aaPredicted RBP17.86■□□□□ 0.45
SUDS3-204ENST00000543473 LIM2P55344 173 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 UBE2MP61081 183 aaKnown RBP17.86■□□□□ 0.45
SUDS3-204ENST00000543473 GLYATL3Q5SZD4 288 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 FAAP20Q6NZ36 180 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 C8orf82Q6P1X6 216 aaPredicted RBP17.86■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF836Q6ZNA1 936 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 LY75O60449 1722 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 LOC100289279A0A1B0GTE1 492 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF705FA8MVS1 300 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms