RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	NUAK2	Q9H093	628 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	GLIPR2	Q9H4G4	154 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	NIPAL2	Q9H841	368 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	C3orf14	Q9HBI5	128 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	SERHL	Q9NQF3	203 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	DCAF13	Q9NV06	445 aa	Known RBP	5.74	□□□□□ -1.49
CIT-213	ENST00000543324	ADPRHL2	Q9NX46	363 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	KLHL21	Q9UJP4	597 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.74	□□□□□ -1.49
CIT-213	ENST00000543324	NUP50	Q9UKX7	468 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	PTGDR2	Q9Y5Y4	395 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	AUP1	Q9Y679	476 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	PRR14L	Q5THK1	2151 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	ABCA13	Q86UQ4	5058 aa		5.74	□□□□□ -1.49
CIT-213	ENST00000543324	TRBV5-3	A0A0A0MS03	114 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	ELOVL7	A1L3X0	281 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	PTGES3L	E9PB15	166 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324		M0R082	166 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CXCR6	O00574	342 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CTDSP2	O14595	271 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	GNGT2	O14610	69 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	DVL2	O14641	736 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	ANKRD28	O15084	1053 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	XPNPEP2	O43895	674 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	FAM20B	O75063	409 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	RCBTB2	O95199	551 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	IL33	O95760	270 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	FADS2	O95864	444 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	IGKV1D-16	P01601	117 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	MT-ND1	P03886	318 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	NGFR	P08138	427 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CYP4B1	P13584	511 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CTRB1	P17538	263 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	BMP5	P22003	454 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	PRKACB	P22694	351 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CTSS	P25774	331 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	GTF2E2	P29084	291 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	EVI2B	P34910	448 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	MPI	P34949	423 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	MAP2K4	P45985	399 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	SLC15A1	P46059	708 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	OR3A3	P47888	321 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CLK1	P49759	484 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	DIO3	P55073	304 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	ATP5J2	P56134	94 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	UFM1	P61960	85 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	LSM3	P62310	102 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CTAG1A	P78358	180 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	FOXF2	Q12947	444 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	GANAB	Q14697	944 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	TIMM50	Q3ZCQ8	353 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	SPANXN2	Q5MJ10	180 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	FAM120AOS	Q5T036	256 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CTRB2	Q6GPI1	263 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	SCIMP	Q6UWF3	145 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	HDDC2	Q7Z4H3	204 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	TMEM179B	Q7Z7N9	219 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	YRDC	Q86U90	279 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	RNF130	Q86XS8	419 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	MICU2	Q8IYU8	434 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	ELMOD2	Q8IZ81	293 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	RDH10	Q8IZV5	341 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	OR2T12	Q8NG77	320 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	OR2M3	Q8NG83	312 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	LINC01560	Q8TB33	94 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CNIH3	Q8TBE1	160 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	ELP4	Q96EB1	424 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	ADO	Q96SZ5	270 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	SFXN3	Q9BWM7	321 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	GABARAPL3	Q9BY60	117 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	RACGAP1	Q9H0H5	632 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	EXO5	Q9H790	373 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	RPRD1B	Q9NQG5	326 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	SIRT3	Q9NTG7	399 aa	Predicted RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	DDX28	Q9NUL7	540 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	FAM120C	Q9NX05	1096 aa	Known RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	ASIC5	Q9NY37	505 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	B3GNT2	Q9NY97	397 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	TAS2R9	Q9NYW1	312 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	KLRF1	Q9NZS2	232 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	FLRT3	Q9NZU0	649 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	TBC1D24	Q9ULP9	559 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	MAPRE3	Q9UPY8	281 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	CAMK2A	Q9UQM7	478 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	POLR3H	Q9Y535	204 aa	Predicted RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	GMPPB	Q9Y5P6	360 aa		5.73	□□□□□ -1.49
CIT-213	ENST00000543324	MAGED1	Q9Y5V3	778 aa	Predicted RBP	5.73	□□□□□ -1.49
CIT-213	ENST00000543324	DNAH9	Q9NYC9	4486 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	CSMD3	Q7Z407	3707 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	MEIOC	A2RUB1	952 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	ZSCAN5B	A6NJL1	495 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	GSTA4	O15217	222 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	LMX1B	O60663	402 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	TMCC2	O75069	709 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	ZNF780A	O75290	641 aa	Predicted RBP	5.72	□□□□□ -1.49
CIT-213	ENST00000543324	MTRF1	O75570	445 aa	Known RBP	5.72	□□□□□ -1.49
CIT-213	ENST00000543324	REM1	O75628	298 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	TRAPPC6A	O75865	159 aa		5.72	□□□□□ -1.49
CIT-213	ENST00000543324	NKX2-2	O95096	273 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms