RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 HMBOX1Q6NT76 420 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 TTC33Q6PID6 262 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 CARM1Q86X55 608 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 UEVLDQ8IX04 471 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 DEPDC4Q8N2C3 294 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 WFDC11Q8NEX6 87 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 OR2T12Q8NG77 320 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 ADAMTS16Q8TE57 1224 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 RCN3Q96D15 328 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 MPP4Q96JB8 637 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 C1QTNF6Q9BXI9 259 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 GSX2Q9BZM3 304 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 PCDHAC1Q9H158 963 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 CXorf56Q9H5V9 222 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 ZNF701Q9NV72 531 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 MRPL39Q9NYK5 338 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 B3GAT1Q9P2W7 334 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 SEC14L4Q9UDX3 406 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 USP22Q9UPT9 525 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 LAMP3Q9UQV4 416 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 RCE1Q9Y256 329 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 SH3GLB1Q9Y371 365 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 MAGED1Q9Y5V3 778 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 CHD3Q12873 2000 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 C2CD3Q4AC94 2353 aa8.53□□□□□ -1.04
TNFRSF1A-214ENST00000543048 YLPM1P49750 1951 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ELOVL7A1L3X0 281 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ZNF726A6NNF4 738 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 FAM220BPB1ANY3 271 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 SHISA9B4DS77 424 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 RPL36A-HNRNPH2H7BZ11 118 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 M0R1B8 84 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 PLPP3O14495 311 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 AKAP8O43823 692 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 OR6A2O95222 327 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 HPRP00739 348 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 MT-ATP6P00846 226 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 THY1P04216 161 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 HIST1H2ABP04908 130 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 DANCRP0C864 163 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 PTH2RP49190 550 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 RPS4XP62701 263 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 SELENOWP63302 87 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 LGALS3BPQ08380 585 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 CYBRD1Q53TN4 286 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 Q5PR19 223 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 SLC22A25Q6T423 547 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 KLHL24Q6TFL4 600 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 NHLRC1Q6VVB1 395 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 HIST3H2AQ7L7L0 130 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ARPINQ7Z6K5 226 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 PXKQ7Z7A4 578 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 KRTAP1-3Q8IUG1 177 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 SLC15A3Q8IY34 581 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 MICU2Q8IYU8 434 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 GPR137CQ8N3F9 429 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 PLPP7Q8NBV4 271 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 PIK3C3Q8NEB9 887 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 KBTBD8Q8NFY9 601 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 OR1K1Q8NGR3 316 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 OR5J2Q8NH18 312 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 MAGEE2Q8TD90 523 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 BCL2L2Q92843 193 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 HIST1H2ACQ93077 130 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 PERPQ96FX8 193 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 LRR1Q96L50 414 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 MOGAT1Q96PD6 335 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 SLC19A3Q9BZV2 496 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 POLR2J2Q9GZM3 115 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 POLR2J3Q9H1A7 115 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 LRMDAQ9H2I8 198 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 GPR35Q9HC97 309 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 OBP2BQ9NPH6 170 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 DLL4Q9NR61 685 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 CMTM6Q9NX76 183 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 SLC7A7Q9UM01 511 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 NOX1Q9Y5S8 564 aa8.52□□□□□ -1.05
TNFRSF1A-214ENST00000543048 E7EQL1 145 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 LRRN3E7EW58 273 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 OVOL3O00110 214 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 TRAF3IP2O43734 574 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 CH25HO95992 272 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 CD8AP01732 235 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ADORA3P0DMS8 318 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 HLA-DOBP13765 273 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 PTNP21246 168 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 AHCYP23526 432 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 NUDT2P50583 147 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 CDH11P55287 796 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 SH3BGRP55822 239 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ATP5J2P56134 94 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 UBE2NP61088 152 aaKnown RBP8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ARF1P84077 181 aaKnown RBP8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 MXRA7P84157 204 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ROR2Q01974 943 aaKnown RBP8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 LIPEQ05469 1076 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 PUDPQ08623 228 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ZP4Q12836 540 aa8.51□□□□□ -1.05
TNFRSF1A-214ENST00000543048 ZNF74Q16587 644 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms