RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 RAB22AQ9UL26 194 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 NDRG4Q9ULP0 352 aaKnown RBP12.13□□□□□ -0.47
TNC-212ENST00000542877 RGPD1P0DJD0 1748 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
TNC-212ENST00000542877 GLCEO94923 617 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ARNTP27540 789 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 TEAD1P28347 426 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 CD38P28907 300 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 EBPQ15125 230 aaKnown RBP12.13□□□□□ -0.47
TNC-212ENST00000542877 PDLIM3Q53GG5 364 aaPredicted RBP12.13□□□□□ -0.47
TNC-212ENST00000542877 WDR88Q6ZMY6 472 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ADGRE4PQ86SQ3 457 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 PLPP5Q8NEB5 264 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ST7LQ8TDW4 575 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 BTF3L4Q96K17 158 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 GFOD1Q9NXC2 390 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 HAO2Q9NYQ3 351 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 MCRIP1C9JLW8 97 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 HCRTR1O43613 425 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 F11P03951 625 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 BLVRBP30043 206 aaPredicted RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 GJA4P35212 333 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 HTR5AP47898 357 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 OVCH1Q7RTY7 1134 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 MDGA2Q7Z553 956 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 RAB39BQ96DA2 213 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 LCORQ96JN0 433 aaPredicted RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 MBOAT4Q96T53 435 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 ZNF416Q9BWM5 594 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 HDAC8Q9BY41 377 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 SELENOIQ9C0D9 397 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 PUS1Q9Y606 427 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNC-212ENST00000542877 C1QBP02746 253 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 KITLGP21583 273 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 MCCD1P59942 119 aaPredicted RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 MRPS21P82921 87 aaKnown RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 SSX2Q16385 188 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 ZNF74Q16587 644 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 DUSP6Q16828 381 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 BPHLQ86WA6 291 aaPredicted RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 ZFP82Q8N141 532 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 ZNF610Q8N9Z0 462 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 MED30Q96HR3 178 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 C1QTNF3Q9BXJ4 246 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 TMED7-TICAM2A0A0A6YYA0 188 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 TMEM200CA6NKL6 621 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 C17orf112F2Z3M2 114 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 RAB4AP20338 218 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 M6PRP20645 277 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 CPT2P23786 658 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 SLC35A1P78382 337 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 C11orf91Q3C1V1 193 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 TMEM176BQ3YBM2 270 aaPredicted RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 PPP1R3BQ86XI6 285 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 CPT1CQ8TCG5 803 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 OCSTAMPQ9BR26 566 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 DNMT3BQ9UBC3 853 aaKnown RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 TMED7Q9Y3B3 224 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 C4AP0C0L4 1744 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 C4BP0C0L5 1744 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 UTS2O95399 124 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 KLKB1P03952 638 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 HBG1P69891 147 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 HBG2P69892 147 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 CSNK1G2P78368 415 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 BRICD5Q6PL45 260 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 ZNF836Q6ZNA1 936 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 PHOSPHO2Q8TCD6 241 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 LINC01599Q8WXQ3 324 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 UBE2FQ969M7 185 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 NKX3-1Q99801 234 aaPredicted RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 CDCA4Q9BXL8 241 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 CHST8Q9H2A9 424 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 E9PI62 339 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 MRPL33O75394 65 aaKnown RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 GP2P55259 537 aaKnown RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 MAT1AQ00266 395 aaKnown RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 ACVR1Q04771 509 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 MFAP5Q13361 173 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 SMAD2Q15796 467 aaKnown RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 SYT14P1Q58G82 188 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 FAM122BQ7Z309 247 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 ANKRD9Q96BM1 317 aaPredicted RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 GABARAPL3Q9BY60 117 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 PPT2Q9UMR5 302 aa12.12□□□□□ -0.47
TNC-212ENST00000542877 GPR55Q9Y2T6 319 aaPredicted RBP12.12□□□□□ -0.47
TNC-212ENST00000542877 NSG1A0A0A6YYJ2 146 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 MDFIC2A0A1B0GVS7 189 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 ZNF728P0DKX0 622 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 NME2P22392 152 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 AADACL3Q5VUY0 350 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 TMEM64Q6YI46 380 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 TMEFF1Q8IYR6 380 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms