RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 ACTR10Q9NZ32 417 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 MED11Q9P086 117 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 ZNF337Q9Y3M9 751 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 SLC22A23A1A5C7 686 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 OR6C74A6NCV1 312 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 A8MXK9 166 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 GOSR2O14653 212 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 ACTR1BP42025 376 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 ACTR1AP61163 376 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 RUNX3Q13761 415 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 GK2Q14410 553 aaPredicted RBP11.8□□□□□ -0.52
DDX11-223ENST00000542838 GSG1LQ6UXU4 331 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 CA13Q8N1Q1 262 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 OR1E3Q8WZA6 343 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 FAM3CQ92520 227 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 FGF13Q92913 245 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 ANKRD9Q96BM1 317 aaPredicted RBP11.8□□□□□ -0.52
DDX11-223ENST00000542838 TOE1Q96GM8 510 aaKnown RBP11.8□□□□□ -0.52
DDX11-223ENST00000542838 TSSK2Q96PF2 358 aa11.8□□□□□ -0.52
DDX11-223ENST00000542838 A0A087WUJ7 227 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 POM121BA6NF01 834 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 F5H5P2 479 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 H3BSH0 61 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 ADH7P40394 386 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 CDKN2AP42771 156 aaKnown RBP11.79□□□□□ -0.52
DDX11-223ENST00000542838 LIPNQ5VXI9 398 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 ZNF776Q68DI1 518 aaPredicted RBP11.79□□□□□ -0.52
DDX11-223ENST00000542838 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 NAXDQ8IW45 347 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 SLC6A17Q9H1V8 727 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 FRRS1LQ9P0K9 344 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 HEATR5AQ86XA9 2040 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 A0A1B0GTH9 108 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 TCRBV16S1A1N1A0A5B0 115 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 BLOC1S5-TXNDC5H3BN57 136 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 EGFP01133 1207 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 TANGO2Q6ICL3 276 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 OR7E24Q6IFN5 339 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 LRRTM1Q86UE6 522 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 JAZF1Q86VZ6 243 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 OR2AK2Q8NG84 335 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 TSACCQ96A04 125 aaPredicted RBP11.79□□□□□ -0.52
DDX11-223ENST00000542838 TMEM138Q9NPI0 162 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 MRM2Q9UI43 246 aaKnown RBP11.79□□□□□ -0.52
DDX11-223ENST00000542838 KLHDC2Q9Y2U9 406 aa11.79□□□□□ -0.52
DDX11-223ENST00000542838 H7C417 338 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 XRCC3O43542 346 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 UPK3AO75631 287 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 CALCRP30988 508 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 SEC13P55735 322 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 LRRN1Q6UXK5 716 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 CFAP77Q6ZQR2 320 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 SLC16A9Q7RTY1 509 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 ZNF227Q86WZ6 799 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 STPG2Q8N412 459 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 OR4D10Q8NGI6 311 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 OR8K3Q8NH51 312 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 STARD5Q9NSY2 213 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 MTFP1Q9UDX5 166 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 PLRG1O43660 514 aaKnown RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 APODP05090 189 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 FCER2P06734 321 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 FGF2P09038 288 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 PRPS1P60891 318 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 MAT1AQ00266 395 aaKnown RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 DCAF12L2Q5VW00 463 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 DNM1P46Q6ZS02 220 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 PDZD9Q8IXQ8 264 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 BVESQ8NE79 360 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 TNFAIP8L1Q8WVP5 186 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 DMRTA2Q96SC8 542 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 IKZF2Q9UKS7 526 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 MPDZO75970 2070 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 TRAV8-7A0A075B6U6 113 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 H0YC42 278 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 NUPL2O15504 423 aaKnown RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 CSTAP01040 98 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 CSF1P09603 554 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 SLC35E2P0CK97 266 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 AQP2P41181 271 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 GMFBP60983 142 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 ZNF273Q14593 569 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 MELKQ14680 651 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 NNATQ16517 81 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 ODF4Q2M2E3 257 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 YOD1Q5VVQ6 348 aaPredicted RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 C11orf88Q6PI97 169 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 C10orf53Q8N6V4 93 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 HOXB13Q92826 284 aaPredicted RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 CCDC74AQ96AQ1 378 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 LMF2Q9BU23 707 aaKnown RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 B3GNT4Q9C0J1 378 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 SRA1Q9HD15 236 aaKnown RBP11.78□□□□□ -0.52
DDX11-223ENST00000542838 IL23AQ9NPF7 189 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 GLS2Q9UI32 602 aa11.78□□□□□ -0.52
DDX11-223ENST00000542838 TRBV5-5A0A0J9YX44 114 aa11.77□□□□□ -0.53
DDX11-223ENST00000542838 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.53
DDX11-223ENST00000542838 TOR1AO14656 332 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms