RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 EMC9Q9Y3B6 208 aa7.69□□□□□ -1.18
CLSTN3-212ENST00000541770 FAM32AQ9Y421 112 aaKnown RBP7.69□□□□□ -1.18
CLSTN3-212ENST00000541770 RNF115Q9Y4L5 304 aa7.69□□□□□ -1.18
CLSTN3-212ENST00000541770 MAGED1Q9Y5V3 778 aaPredicted RBP7.69□□□□□ -1.18
CLSTN3-212ENST00000541770 CUBNO60494 3623 aa7.69□□□□□ -1.18
CLSTN3-212ENST00000541770 ZANQ9Y493 2812 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 A0A1W2PRQ8 180 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 TCRBV3S1A0A5B6 114 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 HTR3EA5X5Y0 456 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 SMAD9O15198 467 aaKnown RBP7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 SSX4O60224 188 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 CYTIPO60759 359 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 SS18L1O75177 396 aaPredicted RBP7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 MT-ATP6P00846 226 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 IGHV4-39P01824 125 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 BGLAPP02818 100 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 FABP3P05413 133 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 CD3EP07766 207 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 RPS5P46782 204 aaKnown RBP7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 YAP1P46937 504 aaKnown RBP7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 OR2B6P58173 313 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 CHRNB3Q05901 458 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 DGCR6Q14129 220 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 FLOT2Q14254 428 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 TRAM2Q15035 370 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 OR7A5Q15622 319 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 FAM98BQ52LJ0 330 aaKnown RBP7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 C6orf52Q5T4I8 152 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 STAC2Q6ZMT1 411 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 ZDHHC21Q8IVQ6 265 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 NKAIN4Q8IVV8 208 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 ADPRHL1Q8NDY3 354 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 PIK3C3Q8NEB9 887 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 OR6K3Q8NGY3 331 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 PIGXQ8TBF5 258 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 SMAP2Q8WU79 429 aaPredicted RBP7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM239Q8WW34 195 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 ROBO4Q8WZ75 1007 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 TAAR8Q969N4 342 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF347Q96SE7 839 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 RHNO1Q9BSD3 238 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 C12orf49Q9H741 205 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 NMNAT1Q9HAN9 279 aaPredicted RBP7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 BCO1Q9HAY6 547 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 MAN2C1Q9NTJ4 1040 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 KLHL9Q9P2J3 617 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 CORINQ9Y5Q5 1042 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 V9GYQ6 96 aa7.68□□□□□ -1.18
CLSTN3-212ENST00000541770 IGKV3D-15A0A087WSY6 115 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 AQP7P3A6NL99 342 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF724A8MTY0 619 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 hCG_2039718K7EN88 272 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 OVOL3O00110 214 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 VAMP5O95183 116 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 MT-ND1P03886 318 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 H1F0P07305 194 aaKnown RBP7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 RAP2AP10114 183 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 PTNP21246 168 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 P2RY4P51582 365 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 SLC16A1P53985 500 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 SMIM11AP58511 58 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 RASGEF1BQ0VAM2 473 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 TSC22D1Q15714 1073 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF74Q16587 644 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 OTUD3Q5T2D3 398 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 BEND4Q6ZU67 534 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 STK32CQ86UX6 486 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 ADGRG5Q8IZF4 528 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 RNF113BQ8IZP6 322 aaKnown RBP7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 SCAIQ8N9R8 606 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 KBTBD8Q8NFY9 601 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 LILRB1Q8NHL6 650 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 ABHD3Q8WU67 409 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM255BQ8WV15 326 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 LIPHQ8WWY8 451 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 ACOT11Q8WXI4 607 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 SEPHS2Q99611 448 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 PSD2Q9BQI7 771 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM204Q9BSN7 226 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 SF3B5Q9BWJ5 86 aaKnown RBP7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 SHARPINQ9H0F6 387 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 FKRPQ9H9S5 495 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 MEPEQ9NQ76 525 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 PLSCR4Q9NRQ2 329 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 KLHL13Q9P2N7 655 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 ING1Q9UK53 422 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 B3GALT5Q9Y2C3 310 aa7.67□□□□□ -1.18
CLSTN3-212ENST00000541770 YLPM1P49750 1951 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ABCA1O95477 2261 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 IGHV4-30-2A0A087WSY4 118 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 A0A087WUU8 490 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 IGHV3-15A0A0B4J1V0 119 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 LOC102725191A0A1B0GVB3 256 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 DHRS12A0PJE2 317 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF716A6NP11 495 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF814B7Z6K7 855 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 GPR171O14626 319 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 KRT36O76013 467 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 AKR7A3O95154 331 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 YES1P07947 543 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms