RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-219	ENST00000541513	CEBPG	P53567	150 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	TMEM50B	P56557	158 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	SPCS3	P61009	180 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	RPS4X	P62701	263 aa	Known RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	ERVK-25	P63136	954 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	MYL7	Q01449	175 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	CDR2	Q01850	454 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	NAB1	Q13506	487 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PSMD5	Q16401	504 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	HLA-B	Q31612	363 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	MS4A18	Q3C1V0	323 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	ACCSL	Q4AC99	568 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	MIDN	Q504T8	468 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	C9orf135	Q5VTT2	229 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	DUPD1	Q68J44	220 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	C22orf42	Q6IC83	251 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	TCEAL6	Q6IPX3	200 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	ENPP6	Q6UWR7	440 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	TMPRSS11A	Q6ZMR5	421 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	LRRC74B	Q6ZQY2	392 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	SLC16A14	Q7RTX9	510 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	APTX	Q7Z2E3	356 aa	Known RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	C5orf24	Q7Z6I8	188 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PEG10	Q86TG7	708 aa	Known RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	CACUL1	Q86Y37	369 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	DCP1B	Q8IZD4	617 aa	Known RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	SLC44A3	Q8N4M1	653 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	DEFB123	Q8N688	67 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	KLHDC1	Q8N7A1	406 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	FAM98A	Q8NCA5	519 aa	Known RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	LMO3	Q8TAP4	145 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	LNX1	Q8TBB1	728 aa	Predicted RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	GPR151	Q8TDV0	419 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	TMEM239	Q8WW34	195 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PIK3R3	Q92569	461 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PNPLA2	Q96AD5	504 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	EME1	Q96AY2	570 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PPP1R36	Q96LQ0	422 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	GFM1	Q96RP9	751 aa	Known RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	TSC22D3	Q99576	134 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	WDR77	Q9BQA1	342 aa	Predicted RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	GPR174	Q9BXC1	333 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	OR51B6	Q9H340	312 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	AAMDC	Q9H7C9	122 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	NIPAL2	Q9H841	368 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	NMRAL1	Q9HBL8	299 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PRSS16	Q9NQE7	514 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	GDF3	Q9NR23	364 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	SLC17A5	Q9NRA2	495 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	INIP	Q9NRY2	104 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	C19orf12	Q9NSK7	152 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PLCXD1	Q9NUJ7	323 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	INTS9	Q9NV88	658 aa	Known RBP	4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	EXD2	Q9NVH0	621 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	NDE1	Q9NXR1	346 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	SIGLEC8	Q9NYZ4	499 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	IL36G	Q9NZH8	169 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	KIF25	Q9UIL4	384 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	RAB23	Q9ULC3	237 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	STUB1	Q9UNE7	303 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	MTCH2	Q9Y6C9	303 aa		4.84	□□□□□ -1.63
DDB1-219	ENST00000541513	PRSS37	A4D1T9	235 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	C2orf74	A8MZ97	194 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513		I3L4J1	428 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513		M0R3G1	203 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	RFXAP	O00287	272 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	TIMM23	O14925	209 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	INSIG1	O15503	277 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	PFDN1	O60925	122 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	SUPT3H	O75486	399 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	KHDRBS3	O75525	346 aa	Known RBP	4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	ZMPSTE24	O75844	475 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	NXPH2	O95156	264 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	IGHG4	P01861	327 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	PRKCG	P05129	697 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	GSTA1	P08263	222 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	OR4E1	P0C645	316 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	SLC35E2B	P0CK96	405 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	SLC35E2	P0CK97	266 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	HOXB2	P14652	356 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	ZNF26	P17031	533 aa	Predicted RBP	4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	PRPS1L1	P21108	318 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	WARS	P23381	471 aa	Known RBP	4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	DCK	P27707	260 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	PCK1	P35558	622 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	MAGEA5	P43359	124 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	GNG10	P50151	68 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	PLK1	P53350	603 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	OC90	Q02509	493 aa	Predicted RBP	4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	ZNF33A	Q06730	810 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	INCA1	Q0VD86	236 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	CNTN1	Q12860	1018 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	KCNMB1	Q16558	191 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	HAGH	Q16775	308 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	EXOC3L4	Q17RC7	722 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	GOLGA7B	Q2TAP0	167 aa		4.83	□□□□□ -1.64
DDB1-219	ENST00000541513	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.83	□□□□□ -1.64

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