RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 POU5F2Q8N7G0 328 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 TMEM99Q8N816 258 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 SCCPDHQ8NBX0 429 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 OR1J2Q8NGS2 313 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 METTL6Q8TCB7 284 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 APIPQ96GX9 242 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 MS4A3Q96HJ5 214 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 RCC1LQ96I51 464 aaKnown RBP7.92□□□□□ -1.14
YBX3-211ENST00000541351 DCLRE1CQ96SD1 692 aaKnown RBP7.92□□□□□ -1.14
YBX3-211ENST00000541351 BAG1Q99933 345 aaPredicted RBP7.92□□□□□ -1.14
YBX3-211ENST00000541351 ACPTQ9BZG2 426 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 CDH20Q9HBT6 801 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 GPR35Q9HC97 309 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 B3GNT2Q9NY97 397 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 MIOXQ9UGB7 285 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 VPREB3Q9UKI3 123 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 FAM96BQ9Y3D0 163 aa7.92□□□□□ -1.14
YBX3-211ENST00000541351 TMED7-TICAM2A0A0A6YYA0 188 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 RBMY1BA6NDE4 496 aaKnown RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 RBMY1EA6NEQ0 496 aaKnown RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 DUXAA6NLW8 204 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 F5H0A9 414 aaPredicted RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 SCN2BO60939 215 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 CLPTM1O96005 669 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 IGHV4-59P01825 116 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 HLA-HP01893 362 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 RBMY1DP0C7P1 496 aaKnown RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 UROSP10746 265 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 RPS2P15880 293 aaKnown RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 CCNA2P20248 432 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 GTF2E2P29084 291 aaKnown RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 EPHA3P29320 983 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 RYKP34925 604 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 GIPRP48546 466 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 RAB1AP62820 205 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 BTKQ06187 659 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 PMS2P3Q13401 168 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 CEACAM7Q14002 265 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 OR7A5Q15622 319 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 ZNF141Q15928 474 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 IMPG1Q17R60 797 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 NSUN5P1Q3KNT7 163 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 FAM153CQ494X1 144 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 RNF144BQ7Z419 303 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 NDUFA11Q86Y39 141 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 LRRC8AQ8IWT6 810 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 CENPLQ8N0S6 344 aaPredicted RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 ARFGAP2Q8N6H7 521 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 OR56A1Q8NGH5 318 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 OR2T6Q8NHC8 308 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 KIF18AQ8NI77 898 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 VANGL1Q8TAA9 524 aaPredicted RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 PYROXD1Q8WU10 500 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 PPCDCQ96CD2 204 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 NUDT16L1Q9BRJ7 211 aaKnown RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 TMEM106BQ9NUM4 274 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 RPUSD1Q9UJJ7 312 aaKnown RBP7.91□□□□□ -1.14
YBX3-211ENST00000541351 TMED7Q9Y3B3 224 aa7.91□□□□□ -1.14
YBX3-211ENST00000541351 HMX2A2RU54 273 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 LIPT2A6NK58 231 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 IFNL4K9M1U5 179 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 TM9SF1O15321 606 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 SPRY3O43610 288 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 ENSAO43768 121 aaKnown RBP7.9□□□□□ -1.14
YBX3-211ENST00000541351 STX11O75558 287 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 OR4F21O95013 312 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 IGHV3-13P01766 116 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 SERPINA5P05154 406 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 LIPFP07098 398 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 ADH4P08319 380 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 IGLL1P15814 213 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 FAHP16930 419 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 CXCR5P32302 372 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 FGF12P61328 243 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 GABPB1Q06547 395 aaPredicted RBP7.9□□□□□ -1.14
YBX3-211ENST00000541351 PIGFQ07326 219 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 ARHGAP11BQ3KRB8 267 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 COX20Q5RI15 118 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 EXOSC6Q5RKV6 272 aaKnown RBP7.9□□□□□ -1.14
YBX3-211ENST00000541351 ZNF813Q6ZN06 617 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 LINGO2Q7L985 606 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 RNF130Q86XS8 419 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 C11orf44Q8N8P7 122 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 ICA1LQ8NDH6 482 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 WFDC9Q8NEX5 89 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 BHLHE22Q8NFJ8 381 aaPredicted RBP7.9□□□□□ -1.14
YBX3-211ENST00000541351 OR4C13Q8NGP0 309 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 OR5R1Q8NH85 324 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 MOAP1Q96BY2 351 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 ZNF524Q96C55 264 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 OTUB1Q96FW1 271 aaPredicted RBP7.9□□□□□ -1.14
YBX3-211ENST00000541351 METTL2AQ96IZ6 378 aaKnown RBP7.9□□□□□ -1.14
YBX3-211ENST00000541351 NSUN5Q96P11 429 aaKnown RBP7.9□□□□□ -1.14
YBX3-211ENST00000541351 TOR3AQ9H497 397 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 EXOSC3Q9NQT5 275 aaKnown RBP7.9□□□□□ -1.14
YBX3-211ENST00000541351 ADPRHL2Q9NX46 363 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 SH3BP4Q9P0V3 963 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 TRIM33Q9UPN9 1127 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 POFUT2Q9Y2G5 429 aa7.9□□□□□ -1.14
YBX3-211ENST00000541351 WI2-2373I1.2A0A1W2PRP0 233 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms