RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TYRP1P17643 537 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TLX1P31314 330 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 AKR1C2P52895 323 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 ARFIP1P53367 373 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 AKR1C1Q04828 323 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 PDGFRLQ15198 375 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF626Q68DY1 528 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 OVCH1Q7RTY7 1134 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TMED4Q7Z7H5 227 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TEX19Q8NA77 164 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 S100A16Q96FQ6 103 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 ALG12Q9BV10 488 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 PPA2Q9H2U2 334 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZCCHC4Q9H5U6 513 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TCF7L1Q9HCS4 588 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 THAP10Q9P2Z0 257 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 MRM2Q9UI43 246 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC17A4Q9Y2C5 497 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF281Q9Y2X9 895 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC6A5Q9Y345 797 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 M0QYG6 137 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 PDCD5O14737 125 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 DIO1P49895 249 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 SEC61A1P61619 476 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 LIN54Q6MZP7 749 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 LRFN4Q6PJG9 635 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR14A16Q8NHC5 309 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 SERINC2Q96SA4 455 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TIMM29Q9BSF4 260 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 ACTR6Q9GZN1 396 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 WDR13Q9H1Z4 485 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TCEAL2Q9H3H9 227 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 C12orf10Q9HB07 376 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 OPN4Q9UHM6 478 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 FAM74A7A6NL05 159 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 CYR61O00622 381 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 CD3DP04234 171 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 IFNGR1P15260 489 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 RPS15AP62244 130 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 LTBQ06643 244 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 LINC01590Q5TEZ4 76 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR10K2Q6IF99 312 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 CBLN3Q6UW01 205 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 NPSR1Q6W5P4 371 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 DPY19L4Q7Z388 723 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 PARGQ86W56 976 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 RCBTB1Q8NDN9 531 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 MARC2Q969Z3 335 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 HAO2Q9NYQ3 351 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 KLF15Q9UIH9 416 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ASXL3Q9C0F0 2248 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 C2orf16Q68DN1 1984 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 TRAV18A0A075B6X5 111 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 GPR75O95800 540 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 CTRB1P17538 263 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 CD53P19397 219 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZP3P21754 424 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 S100A11P31949 105 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ART1P52961 327 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ACTA2P62736 377 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ACTG2P63267 376 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 BTG2P78543 158 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 HACD4Q5VWC8 232 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 CTRB2Q6GPI1 263 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ELP2Q6IA86 826 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 MDGA2Q7Z553 956 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 DND1Q8IYX4 353 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 PLPP7Q8NBV4 271 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR6N2Q8NGY6 317 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR1S1Q8NH92 325 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 LHFPL5Q8TAF8 219 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 TNFAIP8L1Q8WVP5 186 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 TMEM106AQ96A25 262 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 RAB7BQ96AH8 199 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ANKRD9Q96BM1 317 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 SGTBQ96EQ0 304 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ADAD1Q96M93 576 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 RAB11FIP5Q9BXF6 653 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 FAM60AQ9NP50 221 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZC4H2Q9NQZ6 224 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 DUSP22Q9NRW4 184 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 TAS2R5Q9NYW4 299 aa9.44□□□□□ -0.9
CDC42SE1-207ENST00000540998 FKTNO75072 461 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 NDUFB6O95139 128 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 AKR7A3O95154 331 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 WNT11O96014 354 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 PLGP00747 810 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 TIMP1P01033 207 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 GTF2F2P13984 249 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 GAS6Q14393 721 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 C4orf46Q504U0 113 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 FAM69AQ5T7M9 428 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC6A19Q695T7 634 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 RTN4RL2Q86UN3 420 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 ZNF454Q8N9F8 522 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 LSM14AQ8ND56 463 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR2M4Q96R27 311 aa9.43□□□□□ -0.9
CDC42SE1-207ENST00000540998 ADAT1Q9BUB4 502 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms