RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 CACYBPQ9HB71 228 aaKnown RBP23.03■■□□□ 1.28
CHFR-218ENST00000540963 THUMPD1Q9NXG2 353 aaKnown RBP23.03■■□□□ 1.28
CHFR-218ENST00000540963 IFT52Q9Y366 437 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 NOX1Q9Y5S8 564 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 PNPP00491 289 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 ZNF14P17017 642 aaPredicted RBP23.02■■□□□ 1.28
CHFR-218ENST00000540963 COL8A2P25067 703 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 IL12AP29459 219 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 MVDP53602 400 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 UFM1P61960 85 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 MSMPQ1L6U9 139 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 FAM69AQ5T7M9 428 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 ATG16L1Q676U5 607 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 NET1Q7Z628 596 aaPredicted RBP23.02■■□□□ 1.28
CHFR-218ENST00000540963 SERPINA11Q86U17 422 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 KTI12Q96EK9 354 aaPredicted RBP23.02■■□□□ 1.28
CHFR-218ENST00000540963 LRR1Q96L50 414 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 ZNF75AQ96N20 296 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 FBXL3Q9UKT7 428 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 CHST2Q9Y4C5 530 aa23.02■■□□□ 1.28
CHFR-218ENST00000540963 A0A0G2JPF8 293 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 HNRNPCL2B2RXH8 293 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 HNRNPCL3B7ZW38 293 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 SDHDO14521 159 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 HNRNPCL1O60812 293 aaKnown RBP23.01■■□□□ 1.27
CHFR-218ENST00000540963 HNRNPCL4P0DMR1 293 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 EPHA1P21709 976 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 LMO4P61968 165 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 FXNQ16595 210 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 MMEL1Q495T6 779 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 CARM1Q86X55 608 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 ADPRHL1Q8NDY3 354 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 SLC38A5Q8WUX1 472 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 ZNF275Q9NSD4 429 aaPredicted RBP23.01■■□□□ 1.27
CHFR-218ENST00000540963 AIG1Q9NVV5 245 aa23.01■■□□□ 1.27
CHFR-218ENST00000540963 ZNF346Q9UL40 294 aaKnown RBP23.01■■□□□ 1.27
CHFR-218ENST00000540963 RFXANKO14593 260 aa23■■□□□ 1.27
CHFR-218ENST00000540963 TRAF3IP2O43734 574 aaPredicted RBP23■■□□□ 1.27
CHFR-218ENST00000540963 HLA-HP01893 362 aa23■■□□□ 1.27
CHFR-218ENST00000540963 BCHEP06276 602 aa23■■□□□ 1.27
CHFR-218ENST00000540963 MYBPC1Q00872 1141 aa23■■□□□ 1.27
CHFR-218ENST00000540963 H1FNTQ75WM6 255 aaPredicted RBP23■■□□□ 1.27
CHFR-218ENST00000540963 SNX32Q86XE0 403 aa23■■□□□ 1.27
CHFR-218ENST00000540963 C20orf196Q8IYI0 205 aa23■■□□□ 1.27
CHFR-218ENST00000540963 GLB1L3Q8NCI6 653 aaPredicted RBP23■■□□□ 1.27
CHFR-218ENST00000540963 SLC38A4Q969I6 547 aa23■■□□□ 1.27
CHFR-218ENST00000540963 LPAR2Q9HBW0 351 aa23■■□□□ 1.27
CHFR-218ENST00000540963 TREM2Q9NZC2 230 aa23■■□□□ 1.27
CHFR-218ENST00000540963 M0R082 166 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 ZCCHC18P0CG32 403 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 CD79AP11912 226 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 DSTNP60981 165 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 MFSD13AQ14CX5 517 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 FAHD2BQ6P2I3 314 aaPredicted RBP22.99■■□□□ 1.27
CHFR-218ENST00000540963 ANKRD42Q8N9B4 389 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 ZNF417Q8TAU3 575 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 FAHD2AQ96GK7 314 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 MS4A3Q96HJ5 214 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 ZNF587Q96SQ5 575 aaPredicted RBP22.99■■□□□ 1.27
CHFR-218ENST00000540963 ZBTB18Q99592 522 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 SYT3Q9BQG1 590 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 NARFLQ9H6Q4 476 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 B3GAT2Q9NPZ5 323 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 SEC14L4Q9UDX3 406 aa22.99■■□□□ 1.27
CHFR-218ENST00000540963 TMEM247A6NEH6 219 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 M0R3G1 203 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 SNNO75324 88 aaPredicted RBP22.98■■□□□ 1.27
CHFR-218ENST00000540963 RP2O75695 350 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 SEC14L2O76054 403 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 TCN1P20061 433 aaPredicted RBP22.98■■□□□ 1.27
CHFR-218ENST00000540963 CRATP43155 626 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 ALDH3B1P43353 468 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 NME5P56597 212 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 GALK2Q01415 458 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 GKAP1Q5VSY0 366 aaPredicted RBP22.98■■□□□ 1.27
CHFR-218ENST00000540963 YIPF5Q969M3 257 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 SUCNR1Q9BXA5 334 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 WDR55Q9H6Y2 383 aaPredicted RBP22.98■■□□□ 1.27
CHFR-218ENST00000540963 SLC52A3Q9NQ40 469 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 G6PC2Q9NQR9 355 aa22.98■■□□□ 1.27
CHFR-218ENST00000540963 TMEM120BA0PK00 339 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 WNT9BO14905 357 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 PPIHO43447 177 aaKnown RBP22.97■■□□□ 1.27
CHFR-218ENST00000540963 IL6P05231 212 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 ETFAP13804 333 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 SEC24CP53992 1094 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 PDCD4Q53EL6 469 aaKnown RBP22.97■■□□□ 1.27
CHFR-218ENST00000540963 PHYHD1Q5SRE7 291 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 ACSM5Q6NUN0 579 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 ZNF813Q6ZN06 617 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 C1orf229Q6ZS94 237 aaPredicted RBP22.97■■□□□ 1.27
CHFR-218ENST00000540963 UEVLDQ8IX04 471 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 LSMEM1Q8N8F7 131 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 OR6S1Q8NH40 331 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 MGARPQ8TDB4 240 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 TAAR8Q969N4 342 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 PAIP2Q9BPZ3 127 aaKnown RBP22.97■■□□□ 1.27
CHFR-218ENST00000540963 RPS6KB2Q9UBS0 482 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 SLC7A8Q9UHI5 535 aa22.97■■□□□ 1.27
CHFR-218ENST00000540963 GPR45Q9Y5Y3 372 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms