RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TECRLQ5HYJ1 363 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 OTUD3Q5T2D3 398 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 CCNJQ5T5M9 372 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 OLFML2AQ68BL7 652 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 SYT10Q6XYQ8 523 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 C3orf62Q6ZUJ4 267 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 AAED1Q7RTV5 226 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF551Q7Z340 670 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF572Q7Z3I7 529 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 GAS2L3Q86XJ1 694 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 GSPT2Q8IYD1 628 aaKnown RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 TMCO5AQ8N6Q1 288 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 KIR3DL3Q8N743 410 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 RFWD2Q8NHY2 731 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ZFP28Q8NHY6 868 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 FAM76AQ8TAV0 307 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 TAF15Q92804 592 aaKnown RBP eCLIP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF764Q96H86 408 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 LRGUKQ96M69 825 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF48Q96MX3 618 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 STACQ99469 402 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 NAA11Q9BSU3 229 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 C1QTNF3Q9BXJ4 246 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 EBPLQ9BY08 206 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 MRPL37Q9BZE1 423 aaKnown RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 LAT2Q9GZY6 243 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 PIGUQ9H490 435 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 PCNX3Q9H6A9 2034 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 NOX3Q9HBY0 568 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 LZTFL1Q9NQ48 299 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 TMEM181Q9P2C4 612 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 RNF14Q9UBS8 474 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF225Q9UK10 706 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF346Q9UL40 294 aaKnown RBP3.91□□□□□ -1.78
SNHG1-214ENST00000540865 TRAPPC4Q9Y296 219 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 JRKLQ9Y4A0 524 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 DTNAQ9Y4J8 743 aa3.91□□□□□ -1.78
SNHG1-214ENST00000540865 A0A096LPK6 155 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 C5orf63A6NC05 138 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF587BE7ETH6 402 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 NR5A2O00482 541 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 EIF3HO15372 352 aaKnown RBP eCLIP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 TBX19O60806 448 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 KRT33AO76009 404 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 NCR1O76036 304 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 OR4F21O95013 312 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 LGI1O95970 557 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CRYBA1P05813 215 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 SELEP16581 610 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 TSPAN8P19075 237 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 PTMSP20962 102 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 OMGP23515 440 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 GLRXP35754 106 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 HSD17B3P37058 310 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 FRKP42685 505 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CRYBB2P43320 205 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 ALDH3B1P43353 468 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CCR4P51679 360 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 SEC24CP53992 1094 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CDH13P55290 713 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 SH3BGRP55822 239 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 LOXL3P58215 753 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 TUBA1BP68363 451 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 TUBA4AP68366 448 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 SLC35A1P78382 337 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 BTKQ06187 659 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 SKP2Q13309 424 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 PCGF3Q3KNV8 242 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 KLF17Q5JT82 389 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 FAM205BPQ63HN1 556 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 KRT80Q6KB66 452 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CDC73Q6P1J9 531 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 PAQR6Q6TCH4 344 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 C9orf139Q6ZV77 190 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 TUBA1AQ71U36 451 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 RPS27LQ71UM5 84 aaKnown RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 MYPOPQ86VE0 399 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 WDFY1Q8IWB7 410 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CCDC36Q8IYA8 594 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 ZIC4Q8N9L1 334 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 DEFB108BQ8NET1 73 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 OR9K2Q8NGE7 335 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CDC26Q8NHZ8 85 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 FAM110DQ8TAY7 271 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 METTL6Q8TCB7 284 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 GTF3AQ92664 365 aaKnown RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CDS1Q92903 461 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 AURKBQ96GD4 344 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 C16orf58Q96GQ5 468 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 TIMD4Q96H15 378 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CLPTM1LQ96KA5 538 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 ZNF382Q96SR6 550 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 MNTQ99583 582 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 MRI1Q9BV20 369 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 THUMPD3Q9BV44 507 aaKnown RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CCDC106Q9BWC9 280 aa3.9□□□□□ -1.79
SNHG1-214ENST00000540865 SF3B5Q9BWJ5 86 aaKnown RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 MS4A7Q9GZW8 240 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 HEATR1Q9H583 2144 aaKnown RBP3.9□□□□□ -1.79
SNHG1-214ENST00000540865 CTPS2Q9NRF8 586 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms