RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CDHR4	A6H8M9	788 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GDF9	O60383	454 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR5F1	O95221	314 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RAB38	P57729	211 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RGS8	P57771	180 aa	Predicted RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CSNK1G2	P78368	415 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HYAL4	Q2M3T9	481 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C18orf63	Q68DL7	685 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	APOOL	Q6UXV4	268 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MEIOB	Q8N635	442 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR52I2	Q8NH67	350 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OSTF1	Q92882	214 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AMDHD1	Q96NU7	426 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MCHR1	Q99705	422 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ARL6	Q9H0F7	186 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PARD6A	Q9NPB6	346 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LHX9	Q9NQ69	397 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TRIM36	Q9NQ86	728 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GPR27	Q9NS67	375 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PIPOX	Q9P0Z9	390 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MKL2	Q9ULH7	1088 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	EXOG	Q9Y2C4	368 aa	Known RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ANKRD61	A6NGH8	418 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FAM74A7	A6NL05	159 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PSMD9	O00233	223 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FMO6P	O60774	539 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UBL3	O95164	117 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SPDEF	O95238	335 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZGLP1	P0C6A0	271 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NFYA	P23511	347 aa	Predicted RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	F8A1	P23610	371 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IFNGR2	P38484	337 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CCR9	P51686	369 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMPRSS3	P57727	454 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KLF9	Q13886	244 aa	Predicted RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FAM74A3	Q4VXF1	159 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CLVS2	Q5SYC1	327 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SSX6	Q7RTT6	188 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HDDC2	Q7Z4H3	204 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RCBTB1	Q8NDN9	531 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR2T33	Q8NG76	320 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LGALS14	Q8TCE9	139 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ADAMTS15	Q8TE58	950 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RADIL	Q96JH8	1075 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC41A2	Q96JW4	573 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CCNL2	Q96S94	520 aa	Predicted RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TEX12	Q9BXU0	123 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC25A18	Q9H1K4	315 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FKRP	Q9H9S5	495 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HRASLS	Q9HDD0	168 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PTTG3P	Q9NZH4	202 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	B4GALT7	Q9UBV7	327 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PFDN2	Q9UHV9	154 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC7A7	Q9UM01	511 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CACNA1I	Q9P0X4	2223 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C2orf16	Q68DN1	1984 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ALPK2	Q86TB3	2170 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		A0A0A6YYC8	382 aa	Predicted RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		I3L1I5	382 aa	Predicted RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LCMT2	O60294	686 aa	Known RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KHDRBS3	O75525	346 aa	Known RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IGF2	P01344	180 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GKN3P	P0CG01	181 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRG2	P13727	222 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PSMB1	P20618	241 aa	Known RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IL12B	P29460	328 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ADH7	P40394	386 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FBXW4	P57775	412 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RBPJ	Q06330	500 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ST3GAL3	Q11203	375 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HLX	Q14774	488 aa	Predicted RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C2orf68	Q2NKX9	166 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FAM74A1	Q5RGS3	127 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF620	Q6ZNG0	422 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMPRSS7	Q7RTY8	843 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GDF7	Q7Z4P5	450 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FGD2	Q7Z6J4	655 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PAQR7	Q86WK9	346 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CMTM4	Q8IZR5	234 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LINC00518	Q8N0U6	118 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR51A7	Q8NH64	312 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PFN4	Q8NHR9	129 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DIO2	Q92813	273 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PTP4A1	Q93096	173 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GINS4	Q9BRT9	223 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KLHL31	Q9H511	634 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LYRM4	Q9HD34	91 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SPHK1	Q9NYA1	384 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZMIZ1	Q9ULJ6	1067 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CACNA1C	Q13936	2221 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ANAPC1	Q9H1A4	1944 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KNTC1	P50748	2209 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PLSCR5	A0PG75	271 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MCRIP1	C9JLW8	97 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACOT7	O00154	380 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CDX4	O14627	284 aa	Predicted RBP	5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MT-ND5	P03915	603 aa		5.18	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HOXB3	P14651	431 aa	Predicted RBP	5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms