RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 C3orf56Q8N813 242 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 IL17RDQ8NFM7 739 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 MFSD8Q8NHS3 518 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 STK35Q8TDR2 534 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ZNF418Q8TF45 676 aaPredicted RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 YIPF5Q969M3 257 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 NSL1Q96IY1 281 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 TEX37Q96LM6 180 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 SLC35A5Q9BS91 424 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 RBM4Q9BWF3 364 aaKnown RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 RSPO3Q9BXY4 272 aaPredicted RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 TPK1Q9H3S4 243 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 OCEL1Q9H607 264 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ZNF696Q9H7X3 374 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 NPHS2Q9NP85 383 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 DYNLRB1Q9NP97 96 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 SLCO1B3Q9NPD5 702 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ESM1Q9NQ30 184 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ADPRHL2Q9NX46 363 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 ZNF224Q9NZL3 707 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 MYEF2Q9P2K5 600 aaKnown RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 SEC14L4Q9UDX3 406 aa6.27□□□□□ -1.41
YBX3-209ENST00000540747 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.27□□□□□ -1.41
YBX3-209ENST00000540747 A0A096LPI6 279 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 TRAV20A0A0B4J274 112 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 M0R233 179 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 TMPRSS2O15393 492 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 ITM2AO43736 263 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 DEAF1O75398 565 aaPredicted RBP6.26□□□□□ -1.41
YBX3-209ENST00000540747 KRT33AO76009 404 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 TGDSO95455 350 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 CPSF4O95639 269 aaKnown RBP6.26□□□□□ -1.41
YBX3-209ENST00000540747 GSNP06396 782 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 BPGMP07738 259 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 UQCRBP14927 111 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 EPHA1P21709 976 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 IL12AP29459 219 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 GLRXP35754 106 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 CDKN2CP42773 168 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 GPR6P46095 362 aaPredicted RBP6.26□□□□□ -1.41
YBX3-209ENST00000540747 LIMS1P48059 325 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 TMEM33P57088 247 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 HPCAP84074 193 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 SCGB2A2Q13296 93 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 CEACAM16Q2WEN9 425 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 PHYHD1Q5SRE7 291 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 TMEM225Q6GV28 225 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 KRT80Q6KB66 452 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 ASRGL1Q7L266 308 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 C1QL2Q7Z5L3 287 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 LRP11Q86VZ4 500 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 VRK2Q86Y07 508 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 NUDCD3Q8IVD9 361 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 WDFY1Q8IWB7 410 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 KDM8Q8N371 416 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 CLIP4Q8N3C7 705 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 ZDHHC22Q8N966 263 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 OR51F2Q8NH61 342 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 C10orf82Q8WW14 230 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 RDH5Q92781 318 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 GCDHQ92947 438 aaPredicted RBP6.26□□□□□ -1.41
YBX3-209ENST00000540747 MS4A3Q96HJ5 214 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 RSRC1Q96IZ7 334 aaKnown RBP6.26□□□□□ -1.41
YBX3-209ENST00000540747 OR2M2Q96R28 347 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 ZNF747Q9BV97 191 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 TAPBPLQ9BX59 468 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 TMPRSS13Q9BYE2 586 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 DPY30Q9C005 99 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 LRMDAQ9H2I8 198 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 CRLF2Q9HC73 371 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 ZNF275Q9NSD4 429 aaPredicted RBP6.26□□□□□ -1.41
YBX3-209ENST00000540747 TREM2Q9NZC2 230 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 REV1Q9UBZ9 1251 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 HAO1Q9UJM8 370 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 PCDHB10Q9UN67 800 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 TRIM33Q9UPN9 1127 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 USP22Q9UPT9 525 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 GRIP1Q9Y3R0 1128 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 CMAHPQ9Y471 501 aa6.26□□□□□ -1.41
YBX3-209ENST00000540747 WNK1Q9H4A3 2382 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 IGKV1D-42A0A075B6H8 117 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 LOC105371242A0A075B767 164 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 A0A0G2JND7 137 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 SH3PXD2BA1X283 911 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 CCDC154A6NI56 674 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 VSTM5A8MXK1 200 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 ZNF99A8MXY4 864 aaPredicted RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 E9PBE3 544 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 TRIM77I1YAP6 450 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 BIRC5O15392 142 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 CCDC22O60826 627 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 SLC43A1O75387 559 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 RGS9O75916 674 aaPredicted RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 ANP32DO95626 131 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 PNPP00491 289 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 HPRP00739 348 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 HLA-HP01893 362 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 ALDOCP09972 364 aaKnown RBP6.25□□□□□ -1.41
YBX3-209ENST00000540747 IL7RP16871 459 aa6.25□□□□□ -1.41
YBX3-209ENST00000540747 BGNP21810 368 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms