RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 LRFN5Q96NI6 719 aa8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 AMDHD1Q96NU7 426 aa8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 PTGES2Q9H7Z7 377 aa8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 TUBA4BQ9H853 241 aa8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 MAN2C1Q9NTJ4 1040 aa8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 ANGPT4Q9Y264 503 aa8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 EXOGQ9Y2C4 368 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF337Q9Y3M9 751 aa8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF106Q9H2Y7 1883 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-243ENST00000540387 HELZP42694 1942 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 C2CD4DB7Z1M9 353 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 NPIPB8E9PQR5 432 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 GPR39O43194 453 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 UGDHO60701 494 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 F10P00742 488 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 IFNA17P01571 189 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ITGA5P08648 1049 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ARAFP10398 606 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 PTHLHP12272 177 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ACP5P13686 325 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 NDUFA6P56556 154 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 HBA1P69905 142 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 GABREP78334 506 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ACOT7LQ6ZUV0 252 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 PXKQ7Z7A4 578 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ETFBKMTQ8IXQ9 262 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 GPR32P1Q8NGA4 272 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 OR5W2Q8NH69 310 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 RNF141Q8WVD5 230 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 HLA-CQ95604 372 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 RAB24Q969Q5 203 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 PPCDCQ96CD2 204 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 FCRL4Q96PJ5 515 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 WRAP53Q9BUR4 548 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 RSPO3Q9BXY4 272 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 IL21RQ9HBE5 538 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 MYOZ1Q9NP98 299 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 CACFD1Q9UGQ2 172 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 IL20RAQ9UHF4 553 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 MBD1Q9UIS9 605 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 FBXL4Q9UKA2 621 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC27A6Q9Y2P4 619 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 GOLT1BQ9Y3E0 138 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 F5P12259 2224 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF749O43361 778 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 SNRNP70P08621 437 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 DAOP14920 347 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 GJA4P35212 333 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 CASRP41180 1078 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 NSG1P42857 185 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC26A5P58743 744 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 HSD11B2P80365 405 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF750Q32MQ0 723 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 SAPCD1Q5SSQ6 148 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 C11orf87Q6NUJ2 197 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 PLBD1Q6P4A8 553 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 C1QL4Q86Z23 238 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 SFTPA1Q8IWL2 248 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 LRRC56Q8IYG6 542 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 EID2Q8N6I1 236 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 OR4K1Q8NGD4 311 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 DUSP19Q8WTR2 217 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 RFKQ969G6 155 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 HSPA12BQ96MM6 686 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 ZPBPQ9BS86 351 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 NDUFAF3Q9BU61 184 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 FAM86C1Q9NVL1 165 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 TIMM10BQ9Y5J6 103 aa8.68□□□□□ -1.02
CTNNA1-243ENST00000540387 A0A1W2PPK0 400 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 C7orf77A4D0Y5 90 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ANTXRLA6NF34 631 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 A8MWP6 167 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 C9JQL5 133 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 SOX15O60248 233 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CD8AP01732 235 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CD74P04233 296 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 GNALP38405 381 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 PTGER3P43115 390 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 GSK3AP49840 483 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CAV2P51636 162 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CD81P60033 236 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 DDX39BQ13838 428 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 LRRC37A5PQ49AS3 106 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 RPS26P11Q5JNZ5 115 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ARHGAP40Q5TG30 622 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF385CQ66K41 422 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 TRIM40Q6P9F5 258 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 UBE2R2Q712K3 238 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 MTSS1LQ765P7 747 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 MRGPREQ86SM8 312 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 IQCHQ86VS3 1027 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 SIRT6Q8N6T7 355 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 BBS1Q8NFJ9 593 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 OR4K5Q8NGD3 323 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 OR56B1Q8NGI3 324 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 OR4D11Q8NGI4 311 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 OR5AK3PQ8NH89 298 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CYB5D2Q8WUJ1 264 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ROBO4Q8WZ75 1007 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms