RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SLC35F1Q5T1Q4 408 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TTC23Q5W5X9 447 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 FAM122BQ7Z309 247 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ATCAYQ86WG3 371 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CCDC71Q8IV32 467 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 UEVLDQ8IX04 471 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 OR9K2Q8NGE7 335 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 Q96M85 177 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TSPAN32Q96QS1 320 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SF3B5Q9BWJ5 86 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF346Q9UL40 294 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 GMPPBQ9Y5P6 360 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 NOX1Q9Y5S8 564 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 H0YAE9 185 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ARPC3O15145 178 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 WDR1O75083 606 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 IFNGR1P15260 489 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF43P17038 809 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 GGT2P36268 569 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 UQCRFS1P47985 274 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 MYBPC1Q00872 1141 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SRSF1Q07955 248 aaKnown RBP eCLIP16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 MRPL49Q13405 166 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TOP3AQ13472 1001 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 C1DQ13901 141 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 KEAP1Q14145 624 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 C12orf73Q69YU5 71 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 RTL6Q6ICC9 239 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CREB3L2Q70SY1 520 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC35D2Q76EJ3 337 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ST6GALNAC3Q8NDV1 305 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TXNDC15Q96J42 360 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TXNIPQ9H3M7 391 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 MED29Q9NX70 200 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 BAIAP2Q9UQB8 552 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 POLEQ07864 2286 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 DNAJC13O75165 2243 aa16.84■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SPTBN1Q01082 2364 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 A0A1W2PRG6 482 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 CLEC18AA5D8T8 446 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 FIGNL2A6NMB9 653 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 IGHMP01871 453 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 GNAO1P09471 354 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 APEHP13798 732 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 GABRA1P14867 456 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 GRK5P34947 590 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RPS6KA3P51812 740 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SLC16A1P53985 500 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RPL27P61353 136 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RBPJQ06330 500 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 MELKQ14680 651 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 EEF1A1P5Q5VTE0 462 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 CLEC18BQ6UXF7 455 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RPTNQ6XPR3 784 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 DOLPP1Q86YN1 238 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 WDFY1Q8IWB7 410 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ZIC4Q8N9L1 334 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 CLEC18CQ8NCF0 446 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 GALNT11Q8NCW6 608 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ZNF775Q96BV0 537 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RASD2Q96D21 266 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ZNF385AQ96PM9 386 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 TVP23BQ9NYZ1 205 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RAB26Q9ULW5 256 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 FAM215AQ9Y5M1 114 aa16.83■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SPTAN1Q13813 2472 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 TEX13CA0A0J9YWL9 993 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 NPIPB13A6NJU9 1138 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 NPIPB4C9JG80 1138 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 M0R129 80 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 PRRG2O14669 202 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SLC2A10O95528 541 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 TXNDC12O95881 172 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 BCL10O95999 233 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ACVR2AP27037 513 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 NOS3P29474 1203 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SDHAP31040 664 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 PDK3Q15120 406 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ZNF362Q5T0B9 420 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ARMC4Q5T2S8 1044 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 NSUN5P2Q63ZY6 315 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 C3P1Q6ZMU1 363 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 USP51Q70EK9 711 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 P4HA3Q7Z4N8 544 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RPRMLQ8N4K4 120 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 FAM81AQ8TBF8 368 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 UBE2FQ969M7 185 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 MUS81Q96NY9 551 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 EMC6Q9BV81 110 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RNF122Q9H9V4 155 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 CALHM2Q9HA72 323 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 KLHL9Q9P2J3 617 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 GRHPRQ9UBQ7 328 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 CLEC4AQ9UMR7 237 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 FLVCR1Q9Y5Y0 555 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ICE1Q9Y2F5 2266 aa16.82■□□□□ 0.28
TNFRSF1A-213ENST00000540022 IGKV3D-15A0A087WSY6 115 aa16.81■□□□□ 0.28
TNFRSF1A-213ENST00000540022 CD8B2A6NJW9 211 aa16.81■□□□□ 0.28
TNFRSF1A-213ENST00000540022 IMPA2O14732 288 aa16.81■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SURF4O15260 269 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms