RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 NPTX1Q15818 432 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 CARTPTQ16568 116 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 FAM120AOSQ5T036 256 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 CYB5R2Q6BCY4 276 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 PAQR6Q6TCH4 344 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 MUC15Q8N387 334 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 RNF217Q8TC41 542 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 SLC38A4Q969I6 547 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 FAM162AQ96A26 154 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 APH1AQ96BI3 265 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 NSL1Q96IY1 281 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 ADAD1Q96M93 576 aaKnown RBP13.07□□□□□ -0.32
USB1-203ENST00000539737 EPYCQ99645 322 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 WFDC6Q9BQY6 131 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 CBLN4Q9NTU7 201 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 FAIMQ9NVQ4 179 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
USB1-203ENST00000539737 SH3GLB1Q9Y371 365 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 IGKV3D-15A0A087WSY6 115 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 A0A087WUJ7 227 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 TRAPPC13A5PLN9 417 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
USB1-203ENST00000539737 OR2T1O43869 369 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 TPST2O60704 377 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 HSD17B1P14061 328 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 SRD5A1P18405 259 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 COX5AP20674 150 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 CD40P25942 277 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 CDH12P55289 794 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 SELENOWP63302 87 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 CEACAM7Q14002 265 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 RAB35Q15286 201 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 OR7A5Q15622 319 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 FBXW9Q5XUX1 488 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 KLHL17Q6TDP4 642 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 DEFB107AQ8IZN7 70 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 OR4D11Q8NGI4 311 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 MFSD8Q8NHS3 518 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 ADAMTS16Q8TE57 1224 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 GEMIN6Q8WXD5 167 aaKnown RBP13.06□□□□□ -0.32
USB1-203ENST00000539737 MSI2Q96DH6 328 aaKnown RBP13.06□□□□□ -0.32
USB1-203ENST00000539737 TPD52L3Q96J77 140 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 DHRS9Q9BPW9 319 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 TMEM43Q9BTV4 400 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 ASB6Q9NWX5 421 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 UPB1Q9UBR1 384 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 MAGEL2Q9UJ55 1249 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 RPS6KA6Q9UK32 745 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 SLC25A15Q9Y619 301 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 ATP23Q9Y6H3 246 aa13.06□□□□□ -0.32
USB1-203ENST00000539737 TRAV36DV7A0A075B6V5 113 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 IGHV4-61A0A0C4DH41 118 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 OR5H1A6NKK0 313 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 B2RBV5 119 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 OR5F1O95221 314 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 ZNF682O95780 498 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 SERPINA1P01009 418 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 SLC16A1P53985 500 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 TAS2R41P59536 307 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 H3F3AP84243 136 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 TGFBR3Q03167 851 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 MFSD13AQ14CX5 517 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 OTUD3Q5T2D3 398 aaPredicted RBP13.05□□□□□ -0.32
USB1-203ENST00000539737 FAM69AQ5T7M9 428 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 OR7E24Q6IFN5 339 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 CASP12Q6UXS9 341 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 DEF8Q6ZN54 512 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 CBLL1Q75N03 491 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 TRPM8Q7Z2W7 1104 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 RBM45Q8IUH3 476 aaKnown RBP13.05□□□□□ -0.32
USB1-203ENST00000539737 FBXL14Q8N1E6 418 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 ARHGAP24Q8N264 748 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 DEPDC4Q8N2C3 294 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 OR6S1Q8NH40 331 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 MPP4Q96JB8 637 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 RADILQ96JH8 1075 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 PTDSS2Q9BVG9 487 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 AMBRA1Q9C0C7 1298 aa13.05□□□□□ -0.32
USB1-203ENST00000539737 SAMD4AQ9UPU9 718 aaKnown RBP13.05□□□□□ -0.32
USB1-203ENST00000539737 IGKV1D-42A0A075B6H8 117 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 LOC100289279A0A1B0GTE1 492 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 AQP7P3A6NL99 342 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 ATP6V1G2-DDX39BF2Z307 99 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 FZD7O75084 574 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 VAMP5O95183 116 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 IFNW1P05000 195 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 TNFRSF1BP20333 461 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 USF1P22415 310 aaPredicted RBP13.04□□□□□ -0.32
USB1-203ENST00000539737 IFNA8P32881 189 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 RPS5P46782 204 aaKnown RBP13.04□□□□□ -0.32
USB1-203ENST00000539737 LSM11P83369 360 aaKnown RBP eCLIP13.04□□□□□ -0.321e-9■■■■■ 34.8
USB1-203ENST00000539737 EGR4Q05215 589 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 FXNQ16595 210 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 IFI44LQ53G44 452 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 TMEM108Q6UXF1 575 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
USB1-203ENST00000539737 RBM15BQ8NDT2 890 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms