RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ZNF275Q9NSD4 429 aaPredicted RBP18.52■□□□□ 0.55
TMEM260-203ENST00000539559 OPN4Q9UHM6 478 aa18.52■□□□□ 0.55
TMEM260-203ENST00000539559 PILRAQ9UKJ1 303 aa18.52■□□□□ 0.55
TMEM260-203ENST00000539559 GPR89AB7ZAQ6 455 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 CDC123O75794 336 aaPredicted RBP18.51■□□□□ 0.55
TMEM260-203ENST00000539559 GPANK1O95872 356 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 CBX7O95931 251 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 HIST1H2ABP04908 130 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 CTSBP07858 339 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 GPR89BP0CG08 455 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 CDKN2AP42771 156 aaKnown RBP18.51■□□□□ 0.55
TMEM260-203ENST00000539559 PSG6Q00889 435 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 GGTLC2Q14390 218 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 EXOSC6Q5RKV6 272 aaKnown RBP18.51■□□□□ 0.55
TMEM260-203ENST00000539559 HIST3H2AQ7L7L0 130 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 DND1Q8IYX4 353 aaKnown RBP18.51■□□□□ 0.55
TMEM260-203ENST00000539559 GATSQ8NAP1 163 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 FLVCR1-AS1Q8TAF5 88 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 HIST1H2ACQ93077 130 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 ELSPBP1Q96BH3 223 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 TM4SF19Q96DZ7 209 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 H0YGG7 62 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 ACOT7O00154 380 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 GPR75O95800 540 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 APODP05090 189 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 ARF3P61204 181 aaPredicted RBP18.51■□□□□ 0.55
TMEM260-203ENST00000539559 MUC20Q8N307 709 aaPredicted RBP18.51■□□□□ 0.55
TMEM260-203ENST00000539559 OR52H1Q8NGJ2 320 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 PATE1Q8WXA2 126 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 STACQ99469 402 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 ALG12Q9BV10 488 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 TMEM138Q9NPI0 162 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 FRRS1LQ9P0K9 344 aa18.51■□□□□ 0.55
TMEM260-203ENST00000539559 DCTN6O00399 190 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 HCRTR1O43613 425 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 RAD1O60671 282 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 ITGA10O75578 1167 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 KDM4BO94953 1096 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 ITPRIPL2Q3MIP1 535 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 LIPNQ5VXI9 398 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 FAM122CQ6P4D5 195 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 FIGLAQ6QHK4 219 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 PARM1Q6UWI2 310 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 ENPP7Q6UWV6 458 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 FAM3CQ92520 227 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 MFRPQ9BY79 579 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 SRA1Q9HD15 236 aaKnown RBP18.5■□□□□ 0.55
TMEM260-203ENST00000539559 C14orf105Q9NVL8 296 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 PFDN2Q9UHV9 154 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 FBXL3Q9UKT7 428 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 SESN1Q9Y6P5 492 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 TBC1D3DA0A087WVF3 549 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 TBC1D3IA0A087WXS9 549 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 PRSS38A1L453 326 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 OR6C74A6NCV1 312 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 TBC1D3LB9A6J9 549 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 CYR61O00622 381 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 GPRIN2O60269 458 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 TBC1D3HP0C7X1 549 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 GABRA1P14867 456 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 LGALS3BPQ08380 585 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 TBC1D3CQ6IPX1 549 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 RNF44Q7L0R7 432 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 TBC1D3Q8IZP1 549 aaPredicted RBP18.5■□□□□ 0.55
TMEM260-203ENST00000539559 OR1E3Q8WZA6 343 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 FGF14Q92915 247 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 MIB2Q96AX9 1013 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 EXOSC3Q9NQT5 275 aaKnown RBP18.5■□□□□ 0.55
TMEM260-203ENST00000539559 MYO15AQ9UKN7 3530 aa18.5■□□□□ 0.55
TMEM260-203ENST00000539559 BET1O15155 118 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 C4BPBP20851 252 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 MAP3K8P41279 467 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 CAPZA2P47755 286 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 LSSP48449 732 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 LTBQ06643 244 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 ZNF273Q14593 569 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 LINC01590Q5TEZ4 76 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 GSG1LQ6UXU4 331 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 ESX1Q8N693 406 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 RELTQ969Z4 430 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 MKKSQ9NPJ1 570 aaPredicted RBP18.49■□□□□ 0.55
TMEM260-203ENST00000539559 MRM2Q9UI43 246 aaKnown RBP18.49■□□□□ 0.55
TMEM260-203ENST00000539559 RLN2P04090 185 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 AQP2P41181 271 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 ACTR1BP42025 376 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 ACTR1AP61163 376 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 SORDQ00796 357 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 FAM74A1Q5RGS3 127 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 SLC36A1Q7Z2H8 476 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 BIVMQ86UB2 503 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 SLC35F3Q8IY50 421 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 C10orf53Q8N6V4 93 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 OR51D1Q8NGF3 324 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 OR51S1Q8NGJ8 323 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 OR1S1Q8NH92 325 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 SCARB1Q8WTV0 552 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 PNPLA2Q96AD5 504 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 SPACA7Q96KW9 195 aa18.49■□□□□ 0.55
TMEM260-203ENST00000539559 RSPH9Q9H1X1 276 aaPredicted RBP18.49■□□□□ 0.55
TMEM260-203ENST00000539559 IKZF2Q9UKS7 526 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms