RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 OR2J2O76002 312 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 MAB21L1Q13394 359 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 TRIP6Q15654 476 aaKnown RBP15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 TRILQ7L0X0 811 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 SLC51BQ86UW2 128 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR2T33Q8NG76 320 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 BRIX1Q8TDN6 353 aaKnown RBP15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 CCDC120Q96HB5 630 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 TNFRSF13CQ96RJ3 184 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 RNF32Q9H0A6 362 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 GALNT9Q9HCQ5 603 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 KNTC1P50748 2209 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 TSC22D2O75157 780 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 PTP4A3O75365 173 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 SCO1O75880 301 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 SLC2A10O95528 541 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 TCN2P20062 427 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 FOLR3P41439 243 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 PGGHGQ32M88 737 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 HES3Q5TGS1 186 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR5M10Q6IEU7 315 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 ATG4DQ86TL0 474 aaPredicted RBP15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 OAFQ86UD1 273 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 LRRC17Q8N6Y2 441 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 RFKQ969G6 155 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 IMMP1LQ96LU5 166 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 ZPBPQ9BS86 351 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 DDA1Q9BW61 102 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 SPRY4Q9C004 299 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 FOXJ2Q9P0K8 574 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 SLC23A1Q9UHI7 598 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 ADAM30Q9UKF2 790 aa15.5■□□□□ 0.07
PCDHB17P-201ENST00000539533 IGKV1D-42A0A075B6H8 117 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 CD8B2A6NJW9 211 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 ELOA3DA6NLF2 546 aaPredicted RBP15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 INMT-MINDY4F8WBC2 141 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 MASP2O00187 686 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 SURF4O15260 269 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 WISP1O95388 367 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 NUDT14O95848 222 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 CD8BP10966 210 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 CFL1P23528 166 aaKnown RBP15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 FHL1Q13642 323 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 ZNF791Q3KP31 576 aaPredicted RBP15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 ELOA3BQ3SY89 546 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 AADACL4Q5VUY2 407 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 FAM205BPQ63HN1 556 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 ZNF57Q68EA5 555 aaPredicted RBP15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 KLHL36Q8N4N3 616 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 ELOA3Q8NG57 546 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 WACQ9BTA9 647 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 ZNF700Q9H0M5 742 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 C12orf10Q9HB07 376 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 POLHQ9Y253 713 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 PCDHGA1Q9Y5H4 931 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 EXPH5Q8NEV8 1989 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 EIF4E2O60573 245 aaKnown RBP15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 SLC19A2O60779 497 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 RCBTB2O95199 551 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 BMP7P18075 431 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 TACR3P29371 465 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 ACSM1Q08AH1 577 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 BICRALQ6AI39 1079 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 VASNQ6EMK4 673 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 SMARCD3Q6STE5 483 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR11G2Q8NGC1 345 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 LRRC20Q8TCA0 184 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 CT55Q8WUE5 264 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 AKAP1Q92667 903 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 HGDQ93099 445 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 CREB3L1Q96BA8 519 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 OTULINQ96BN8 352 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 ZNF649Q9BS31 505 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 B3GNT2Q9NY97 397 aa15.49■□□□□ 0.07
PCDHB17P-201ENST00000539533 CCDC187A0A096LP49 1063 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 BHLHE40O14503 412 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 SLC6A8P48029 635 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 AGFG1P52594 562 aaKnown RBP15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 RAB25P57735 213 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 MRPL28Q13084 256 aaKnown RBP15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 PIP4P1Q86T03 277 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 SLC37A3Q8NCC5 494 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR5W2Q8NH69 310 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 SPRYD4Q8WW59 207 aaPredicted RBP15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 ASB6Q9NWX5 421 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 TCFL5Q9UL49 500 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 SOCS6O14544 535 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 PNMTP11086 282 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 ELK1P19419 428 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 POMZP3Q6PJE2 187 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR4M2Q8NGB6 313 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR8H1Q8NGG4 311 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR52L1Q8NGH7 329 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 OR52N1Q8NH53 320 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 SGTBQ96EQ0 304 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 ADAM19Q9H013 955 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 MCCC2Q9HCC0 563 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 GLTPQ9NZD2 209 aa15.48■□□□□ 0.07
PCDHB17P-201ENST00000539533 NUP50Q9UKX7 468 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms