RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RPL13AP40429 203 aaKnown RBP2.1□□□□□ -2.07
CCDC7-209ENST00000539197 GSSP48637 474 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 SPIBQ01892 262 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 REG3AQ06141 175 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 NCBP1Q09161 790 aaKnown RBP2.1□□□□□ -2.07
CCDC7-209ENST00000539197 SELPLGQ14242 412 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 SLC36A3Q495N2 470 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 C10orf120Q5SQS8 335 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 TMEM225Q6GV28 225 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 CES3Q6UWW8 571 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 PGAM4Q8N0Y7 254 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 OSTF1Q92882 214 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 UFD1Q92890 307 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 COQ10BQ9H8M1 238 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 NOX3Q9HBY0 568 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 SLCO1B3Q9NPD5 702 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 SIRT7Q9NRC8 400 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 BFARQ9NZS9 450 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 KIF16BQ96L93 1317 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 COL27A1Q8IZC6 1860 aaPredicted RBP2.09□□□□□ -2.07
CCDC7-209ENST00000539197 PLA2R1Q13018 1463 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 C7orf66A4D0T2 115 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 CBR3O75828 277 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 DIRAS1O95057 198 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 RCBTB2O95199 551 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 IGLV2-23P01705 113 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 BGLAPP02818 100 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 ZNF30P17039 623 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 GNA11P29992 359 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 CA8P35219 290 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 MDH1P40925 334 aaKnown RBP2.09□□□□□ -2.07
CCDC7-209ENST00000539197 HTD2P86397 168 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 PDIA2Q13087 525 aaKnown RBP2.09□□□□□ -2.07
CCDC7-209ENST00000539197 VGLL4Q14135 290 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 DPYSL2Q16555 572 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 GUCA2BQ16661 112 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 RSPO1Q2MKA7 263 aaPredicted RBP2.09□□□□□ -2.07
CCDC7-209ENST00000539197 CCDC92Q53HC0 331 aaPredicted RBP2.09□□□□□ -2.07
CCDC7-209ENST00000539197 CARD16Q5EG05 197 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 RIPPLY2Q5TAB7 128 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 FBXW9Q5XUX1 488 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 PYHIN1Q6K0P9 492 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 UTS2BQ765I0 119 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 IPMKQ8NFU5 416 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 CXorf40BQ96DE9 158 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 TGM7Q96PF1 710 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 GIN1Q9NXP7 522 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 CALYQ9NYX4 217 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 ZNF222Q9UK12 451 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 MMP17Q9ULZ9 603 aa2.09□□□□□ -2.07
CCDC7-209ENST00000539197 NFASCO94856 1347 aa2.09□□□□□ -2.08
CCDC7-209ENST00000539197 NUP214P35658 2090 aaPredicted RBP2.08□□□□□ -2.08
CCDC7-209ENST00000539197 CABIN1Q9Y6J0 2220 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 PSMC3P17980 439 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 OMGP23515 440 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 DDOSTP39656 456 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 CBX1P83916 185 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 PLD1Q13393 1074 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 PRPSAP1Q14558 356 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 PRSS8Q16651 343 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 DUSP7Q16829 419 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 TTLL9Q3SXZ7 439 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 DMRTC1Q5HYR2 192 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 LYPD2Q6UXB3 125 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 NEGR1Q7Z3B1 354 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 ZSCAN30Q86W11 494 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 THOC6Q86W42 341 aaKnown RBP2.08□□□□□ -2.08
CCDC7-209ENST00000539197 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 TRMT10AQ8TBZ6 339 aaKnown RBP2.08□□□□□ -2.08
CCDC7-209ENST00000539197 GEMIN6Q8WXD5 167 aaKnown RBP2.08□□□□□ -2.08
CCDC7-209ENST00000539197 AURKBQ96GD4 344 aaPredicted RBP2.08□□□□□ -2.08
CCDC7-209ENST00000539197 SLC40A1Q9NP59 571 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 EXD2Q9NVH0 621 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 CD84Q9UIB8 345 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 LAMP5Q9UJQ1 280 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 TIMM10BQ9Y5J6 103 aa2.08□□□□□ -2.08
CCDC7-209ENST00000539197 IGHV3-66A0A0C4DH42 116 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 CIB4A0PJX0 185 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 PLAC8L1A1L4L8 177 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 RGSL1A5PLK6 1076 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 INS-IGF2F8WCM5 200 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 TOM1O60784 492 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 SCGNO76038 276 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 IFNB1P01574 187 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 UGT2B4P06133 528 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 SMIM10L1P0DMW3 83 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 IGHV3-43DP0DP04 118 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 TCN2P20062 427 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 SLC2A5P22732 501 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 LAP3P28838 519 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 RORAP35398 523 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 CYB561P49447 251 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 CASP4P49662 377 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 RGS4P49798 205 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 PPT1P50897 306 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 FGF8P55075 233 aaPredicted RBP2.07□□□□□ -2.08
CCDC7-209ENST00000539197 BPIFB3P59826 476 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 C1orf61Q13536 156 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 OR5I1Q13606 314 aa2.07□□□□□ -2.08
CCDC7-209ENST00000539197 FZD2Q14332 565 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms