RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 MFSD13AQ14CX5 517 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 FAM91A1Q658Y4 838 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 REEP3Q6NUK4 255 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 ULK3Q6PHR2 472 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 BLOC1S3Q6QNY0 202 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 SPATA21Q7Z572 469 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 KRT73Q86Y46 540 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 UEVLDQ8IX04 471 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 CCDC36Q8IYA8 594 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 C20orf196Q8IYI0 205 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF540Q8NDQ6 660 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 OR6S1Q8NH40 331 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 C7orf26Q96N11 449 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 ANKRD27Q96NW4 1050 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 DOK1Q99704 481 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 SPATA5L1Q9BVQ7 753 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 IKZF5Q9H5V7 419 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 SLC52A3Q9NQ40 469 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 VAPAQ9P0L0 249 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 USP22Q9UPT9 525 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 CORINQ9Y5Q5 1042 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 MEGF8Q7Z7M0 2845 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 HEATR1Q9H583 2144 aaKnown RBP10.82□□□□□ -0.68
VAMP1-206ENST00000538970 A0A087WUJ7 227 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 TMEM129A0AVI4 362 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 LRP5LA4QPB2 252 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 MS4A18H0YCH9 400 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 TGFAP01135 160 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 HLA-HP01893 362 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 BGLAPP02818 100 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 ERCC1P07992 297 aaPredicted RBP10.81□□□□□ -0.68
VAMP1-206ENST00000538970 HLA-DOBP13765 273 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 DAOP14920 347 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 NQO1P15559 274 aaKnown RBP10.81□□□□□ -0.68
VAMP1-206ENST00000538970 HNF1AP20823 631 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 PPIBP23284 216 aaKnown RBP10.81□□□□□ -0.68
VAMP1-206ENST00000538970 CAPZA2P47755 286 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 RGS8P57771 180 aaPredicted RBP10.81□□□□□ -0.68
VAMP1-206ENST00000538970 NCALDP61601 193 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 POU3F1Q03052 451 aaPredicted RBP10.81□□□□□ -0.68
VAMP1-206ENST00000538970 RUNX1T1Q06455 604 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 DAG1Q14118 895 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 MS4A18Q3C1V0 323 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 PAGE3Q5JUK9 113 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 CARD17Q5XLA6 110 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 KRT80Q6KB66 452 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 CDK20Q8IZL9 346 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 ZCCHC24Q8N2G6 241 aaKnown RBP10.81□□□□□ -0.68
VAMP1-206ENST00000538970 SCAIQ8N9R8 606 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 NEU4Q8WWR8 484 aaPredicted RBP10.81□□□□□ -0.68
VAMP1-206ENST00000538970 SPDL1Q96EA4 605 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 SLC47A1Q96FL8 570 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 EPYCQ99645 322 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 EBF4Q9BQW3 602 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 EMC6Q9BV81 110 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 C19orf24Q9BVV8 132 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 ASPNQ9BXN1 380 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 DYNLRB1Q9NP97 96 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 B3GNT2Q9NY97 397 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 CCDC167Q9P0B6 97 aa10.81□□□□□ -0.68
VAMP1-206ENST00000538970 PRORSD1PA6NEY8 169 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 VSTM5A8MXK1 200 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 TPST2O60704 377 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 TGDSO95455 350 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 TACSTD2P09758 323 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 GPX2P18283 190 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 AQP1P29972 269 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 IL2RGP31785 369 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 IDH3AP50213 366 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 SCARB2Q14108 478 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 OR1Q1Q15612 314 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 ADRM1Q16186 407 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 GSG1Q2KHT4 349 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 SWT1Q5T5J6 900 aaKnown RBP10.8□□□□□ -0.68
VAMP1-206ENST00000538970 NHLRC1Q6VVB1 395 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF627Q7L945 461 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 WDFY1Q8IWB7 410 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF786Q8N393 782 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 IL17RDQ8NFM7 739 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 RNF217Q8TC41 542 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 CKAP2Q8WWK9 683 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 LRR1Q96L50 414 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF75AQ96N20 296 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 MOGAT1Q96PD6 335 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 WFDC6Q9BQY6 131 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 CCDC28BQ9BUN5 200 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 TMEM38AQ9H6F2 299 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 TMEM27Q9HBJ8 222 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 SLCO1B3Q9NPD5 702 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 MED29Q9NX70 200 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 SELENONQ9NZV5 590 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 CORO2BQ9UQ03 480 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 NOX1Q9Y5S8 564 aa10.8□□□□□ -0.68
VAMP1-206ENST00000538970 MALRD1Q5VYJ5 2156 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 SH3PXD2BA1X283 911 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 LRRN3E7EW58 273 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 LILRA1O75019 489 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 CD79AP11912 226 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 B4GALT1P15291 398 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF14P17017 642 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms