RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 STEAP2Q8NFT2 490 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 DMBX1Q8NFW5 382 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 OR5M8Q8NGP6 311 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 WSB2Q9NYS7 404 aaPredicted RBP16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 CARHSP1Q9Y2V2 147 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 OR10H1Q9Y4A9 318 aa16.99■□□□□ 0.31
SFSWAP-207ENST00000538548 SPP1P10451 314 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 NTHL1P78549 312 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 SRSF4Q08170 494 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 SWI5Q1ZZU3 235 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 LY6G5CQ5SRR4 150 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 C11orf87Q6NUJ2 197 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 LPCAT3Q6P1A2 487 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF227Q86WZ6 799 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 THAP6Q8TBB0 222 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNRF4Q8WWF5 429 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 RNF166Q96A37 237 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 ADAT1Q9BUB4 502 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 PDCD10Q9BUL8 212 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 MRPS30Q9NP92 439 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF629Q9UEG4 869 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 MAFFQ9ULX9 164 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 PRUNE2Q8WUY3 3088 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 A0A0B4J2E0 115 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 A0A1B0GTI1 187 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 A0A1B0GX12 115 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 OR6C68A6NDL8 312 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 CD3DP04234 171 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 ANXA2P07355 339 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 AK4P27144 223 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 SLC35D3Q5M8T2 416 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 DCST2Q5T1A1 773 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 SLC6A19Q695T7 634 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 CLEC1AQ8NC01 280 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 CMSS1Q9BQ75 279 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF559Q9BR84 538 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 LGR4Q9BXB1 951 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 XKR8Q9H6D3 395 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 ASF1BQ9NVP2 202 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 MBD2Q9UBB5 411 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 FBXL21Q9UKT6 434 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 IER3IP1Q9Y5U9 82 aa16.98■□□□□ 0.31
SFSWAP-207ENST00000538548 PSMD9O00233 223 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 NDUFB2O95178 105 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 CSRP1P21291 193 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 RAB28P51157 221 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 NR0B1P51843 470 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 PSMD4P55036 377 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 GUCA2AQ02747 115 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 SSBP1Q04837 148 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 AVPI1Q5T686 147 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 YOD1Q5VVQ6 348 aaPredicted RBP16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 STEAP1BQ6NZ63 245 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 ACOT7LQ6ZUV0 252 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 COX14Q96I36 57 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF426Q9BUY5 554 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 COMMD9Q9P000 198 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 STEAP1Q9UHE8 339 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 MKL2Q9ULH7 1088 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 NPIPA5A0A0B4J1W7 369 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 TMEM82A0PJX8 343 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 RNF222A6NCQ9 220 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 NPIPA7E9PJI5 369 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 CTAG2O75638 210 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 PRNPP04156 253 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 NPIPA8P0DM63 369 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 ACRP10323 421 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 KCNJ3P48549 501 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 AKR1C2P52895 323 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 AKR1C1Q04828 323 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 ZNF684Q5T5D7 378 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 ENPP7Q6UWV6 458 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 SLC39A5Q6ZMH5 540 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 OR6K6Q8NGW6 343 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 ZFP57Q9NU63 452 aa16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 APOBEC3BQ9UH17 382 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-207ENST00000538548 A0A087WV48 116 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 RAD1O60671 282 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 SNAPINO95295 136 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 LRG1P02750 347 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 RBM34P42696 430 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 SOX2P48431 317 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 BLOC1S1P78537 153 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 C3orf33Q6P1S2 294 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 OR5AK2Q8NH90 309 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 ARSGQ96EG1 525 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 SFXN1Q9H9B4 322 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 MYEF2Q9P2K5 600 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 EDARQ9UNE0 448 aa16.96■□□□□ 0.31
SFSWAP-207ENST00000538548 LINC00587B1AMM8 73 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 PRR32B1ATL7 298 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 TGM5O43548 720 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 CRYBA1P05813 215 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 NGFRP08138 427 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 SPI1P17947 270 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 PRSS3P35030 304 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 DLSTP36957 453 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 VWA2Q5GFL6 755 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 H3F3CQ6NXT2 135 aa16.96■□□□□ 0.3
SFSWAP-207ENST00000538548 FAM122BQ7Z309 247 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms