RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 YIF1BQ5BJH7 314 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 RABEPKQ7Z6M1 372 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 ADGRG3Q86Y34 549 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 DTX3Q8N9I9 347 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 APCDD1LQ8NCL9 501 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 OR2T4Q8NH00 348 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 GPR119Q8TDV5 335 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 HSD17B8Q92506 261 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 SLC7A6Q92536 515 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 UPRTQ96BW1 309 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 MAP6Q96JE9 813 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 CTRCQ99895 268 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 NDEL1Q9GZM8 345 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 MOV10Q9HCE1 1003 aaKnown RBP12.69□□□□□ -0.38
LIMK1-208ENST00000538333 NOX4Q9NPH5 578 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 NLKQ9UBE8 527 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 SIT1Q9Y3P8 196 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 N6AMT1Q9Y5N5 214 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 A0A087WV48 116 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 A0A0B4J203 849 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 FAM240BA0A1B0GVZ2 78 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 ANKRD61A6NGH8 418 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 ZNF879B4DU55 563 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 AGRPO00253 132 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 TIAF1O95411 115 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 MT-ATP6P00846 226 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 ANKRD34CP0C6C1 535 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 OR8G3PP0DMU2 310 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 SNRPBP14678 240 aaKnown RBP12.69□□□□□ -0.38
LIMK1-208ENST00000538333 POLR2HP52434 150 aaKnown RBP12.69□□□□□ -0.38
LIMK1-208ENST00000538333 SGCBQ16585 318 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 TBRG1Q3YBR2 411 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 PYHIN1Q6K0P9 492 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 GUSBP11Q6P575 273 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 NFAM1Q8NET5 270 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-208ENST00000538333 HAVCR2Q8TDQ0 301 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 RFT1Q96AA3 541 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 DNAJA3Q96EY1 480 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 ZNF486Q96H40 463 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-208ENST00000538333 GFI1Q99684 422 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 MARVELD1Q9BSK0 173 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 THAP7Q9BT49 309 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-208ENST00000538333 SYT4Q9H2B2 425 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 ANKRD10Q9NXR5 420 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 AK6Q9Y3D8 172 aaKnown RBP12.69□□□□□ -0.38
LIMK1-208ENST00000538333 TMED7-TICAM2A0A0A6YYA0 188 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 A0A1W2PQM1 296 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 SUSD5O60279 629 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 ZNF354AO60765 605 aaPredicted RBP12.68□□□□□ -0.38
LIMK1-208ENST00000538333 AKR7A3O95154 331 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 RENP00797 406 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 SRMP19623 302 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 HLA-DMAP28067 261 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 TATDN3Q17R31 274 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 FAM69AQ5T7M9 428 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 LIPNQ5VXI9 398 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 ZNF57Q68EA5 555 aaPredicted RBP12.68□□□□□ -0.38
LIMK1-208ENST00000538333 MAMDC2Q7Z304 686 aaPredicted RBP12.68□□□□□ -0.38
LIMK1-208ENST00000538333 ANKRD37Q7Z713 158 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 CEP76Q8TAP6 659 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 ORAI1Q96D31 301 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 SMAD5Q99717 465 aaKnown RBP12.68□□□□□ -0.38
LIMK1-208ENST00000538333 NUFIP1Q9UHK0 495 aaKnown RBP12.68□□□□□ -0.38
LIMK1-208ENST00000538333 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 TMED7Q9Y3B3 224 aa12.68□□□□□ -0.38
LIMK1-208ENST00000538333 TVP23AA6NH52 213 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 ACOD1A6NK06 481 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 A8MV72 311 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-208ENST00000538333 SLC25A12O75746 678 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 TACSTD2P09758 323 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 ALOX5APP20292 161 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 MAGEB1P43366 347 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 INPP1P49441 399 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 AGFG1P52594 562 aaKnown RBP12.67□□□□□ -0.38
LIMK1-208ENST00000538333 ACY1Q03154 408 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 GPR176Q14439 515 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 LYSMD4Q5XG99 296 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 C16orf47Q6ZP98 133 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-208ENST00000538333 GRINAQ7Z429 371 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 PM20D2Q8IYS1 436 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 ADAD1Q96M93 576 aaKnown RBP12.67□□□□□ -0.38
LIMK1-208ENST00000538333 DERL3Q96Q80 235 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 DUSP23Q9BVJ7 150 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 HDHD2Q9H0R4 259 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 WDR76Q9H967 626 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 TAS2R10Q9NYW0 307 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 A8MVM7 634 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 C11orf98E9PRG8 122 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 ARHGEF9O43307 516 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 DXOO77932 396 aaKnown RBP12.67□□□□□ -0.38
LIMK1-208ENST00000538333 PRKCAP17252 672 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 AHCYP23526 432 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 SLC6A1P30531 599 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
LIMK1-208ENST00000538333 NKAIN1Q4KMZ8 207 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 PRR23CQ6ZRP0 262 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 FAM220AQ7Z4H9 259 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 ZNF519Q8TB69 540 aa12.67□□□□□ -0.38
LIMK1-208ENST00000538333 DUSP19Q8WTR2 217 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms