RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 MCIDASD6RGH6 385 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 PRR23D1E9PI22 279 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-210ENST00000538120 FABP7O15540 132 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF264O43296 627 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 OR7A10O76100 309 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 PRR23D2P0DMB1 279 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-210ENST00000538120 HK1P19367 917 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 INPP1P49441 399 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 MAB21L1Q13394 359 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 CORO6Q6QEF8 472 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 TMEM91Q6ZNR0 172 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 SLC43A2Q8N370 569 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 CYB561A3Q8NBI2 242 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 OR52N1Q8NH53 320 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 SPRYD4Q8WW59 207 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-210ENST00000538120 ART5Q96L15 291 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 CCDC74BQ96LY2 380 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 GTPBP2Q9BX10 602 aaKnown RBP9.77□□□□□ -0.85
CLIP1-210ENST00000538120 LAT2Q9GZY6 243 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 ISG20L2Q9H9L3 353 aaKnown RBP9.77□□□□□ -0.85
CLIP1-210ENST00000538120 A0A0A6YYJ9 748 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 LOC105371267A0A1B0GV96 52 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ST8SIA5O15466 376 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 SLC43A1O75387 559 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 NDUFB2O95178 105 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 CFIP05156 583 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 HPGDP15428 266 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 LCN1P31025 176 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 RELQ04864 619 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ACSM1Q08AH1 577 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 GPR176Q14439 515 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 SF3A2Q15428 464 aaKnown RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 FCN2Q15485 313 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 GXYLT1Q4G148 440 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 NKAIN1Q4KMZ8 207 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF385CQ66K41 422 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF322Q6U7Q0 402 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 KLBQ86Z14 1044 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 C9orf62Q8N4C0 152 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 KLHL36Q8N4N3 616 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ANGPTL6Q8NI99 470 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ERMAPQ96PL5 475 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 CCNL2Q96S94 520 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 SLC19A3Q9BZV2 496 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 OR51V1Q9H2C8 321 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 STMN3Q9NZ72 180 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 EXTL2Q9UBQ6 330 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 MRTO4Q9UKD2 239 aaKnown RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 MSRB2Q9Y3D2 182 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 OR6C76A6NM76 312 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 RIIAD1A6NNX1 92 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ADAM10O14672 748 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ORC5O43913 435 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 LILRA1O75019 489 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 NOS1APO75052 506 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 PPM1BO75688 479 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 SCO1O75880 301 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 WISP1O95388 367 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 CNOT4O95628 575 aaKnown RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 SYPP08247 313 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 RPS4XP62701 263 aaKnown RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ZNF117Q03924 483 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 EGR4Q05215 589 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 LTBQ06643 244 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 SIGLEC14Q08ET2 396 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 KLHL12Q53G59 568 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 IDNKQ5T6J7 187 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 BCL2L15Q5TBC7 163 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 CREB3L2Q70SY1 520 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ANKRD37Q7Z713 158 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 MARCH3Q86UD3 253 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 C1orf210Q8IVY1 113 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 CCDC28AQ8IWP9 274 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 NFAM1Q8NET5 270 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 AKAP1Q92667 903 aaKnown RBP eCLIP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 OMA1Q96E52 524 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 DDOQ99489 341 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 ADAM19Q9H013 955 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 HDHD2Q9H0R4 259 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 PPIL3Q9H2H8 161 aaKnown RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 IER3IP1Q9Y5U9 82 aa9.76□□□□□ -0.85
CLIP1-210ENST00000538120 COL5A1P20908 1838 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-210ENST00000538120 SEC16AO15027 2179 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 TRAV6A0A075B6T7 132 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 TRIM3O75382 744 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SCRG1O75711 98 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ONECUT2O95948 504 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 HIST1H1CP16403 213 aaKnown RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ABCD3P28288 659 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SRP9P49458 86 aaKnown RBP9.75□□□□□ -0.85
CLIP1-210ENST00000538120 CCR4P51679 360 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 PLCXD2Q0VAA5 305 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 FAM27D1Q5T7N8 215 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 HLA-DQA1Q5Y7H0 255 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 LCN10Q6JVE6 187 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ARHGAP11AQ6P4F7 1023 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SLC29A4Q7RTT9 530 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 ACBD7Q8N6N7 88 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 OR52E2Q8NGJ4 325 aa9.75□□□□□ -0.85
CLIP1-210ENST00000538120 SMAP2Q8WU79 429 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms