RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 DMKNQ6E0U4 476 aaPredicted RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 PTCRAQ6ISU1 281 aaPredicted RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 GPAT4Q86UL3 456 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 PLXDC1Q8IUK5 500 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 LSMEM1Q8N8F7 131 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 ASCC1Q8N9N2 400 aaKnown RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 OR8S1Q8NH09 359 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 OR5AK2Q8NH90 309 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 GRPEL2Q8TAA5 225 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 SMIM19Q96E16 107 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 NPAS1Q99742 590 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 VN1R1Q9GZP7 353 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 MMP25Q9NPA2 562 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 PRDM9Q9NQV7 894 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 KLHL21Q9UJP4 597 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 BAIAP2Q9UQB8 552 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 RCE1Q9Y256 329 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CACNG2Q9Y698 323 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 G3V3Y1 287 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 J3QRE1 110 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 SERPINA3P01011 423 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CSN2P05814 226 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 EPXP11678 715 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 IL11P20809 199 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 RBM34P42696 430 aaKnown RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 EFNA3P52797 238 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CFHR1Q03591 330 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 FHL1Q13642 323 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 KLHL26Q53HC5 615 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CARD17Q5XLA6 110 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 LRFN4Q6PJG9 635 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CORO6Q6QEF8 472 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 C9orf40Q8IXQ3 194 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CMTM4Q8IZR5 234 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 DAZLQ92904 295 aaKnown RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 OR6C1Q96RD1 312 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 AMELYQ99218 206 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 ZMAT3Q9HA38 289 aaKnown RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 LIN7BQ9HAP6 207 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 POLE3Q9NRF9 147 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 KLRF1Q9NZS2 232 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 KLK11Q9UBX7 282 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 ST6GALNAC2Q9UJ37 374 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 MRTO4Q9UKD2 239 aaKnown RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 TMA7Q9Y2S6 64 aaKnown RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 ATG2AQ2TAZ0 1938 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 NOTOA8MTQ0 251 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF593O00488 134 aaPredicted RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 SUSD5O60279 629 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 DHFRP00374 187 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 HEXBP07686 556 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 SLC2A5P22732 501 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 MST1P26927 711 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CSF2RBP32927 897 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 PPICP45877 212 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 EGR4Q05215 589 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 POU4F2Q12837 409 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 OR7A5Q15622 319 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 COMMD2Q86X83 199 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 SLC25A45Q8N413 288 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 TMEM106AQ96A25 262 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CCDC74AQ96AQ1 378 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 TSPAN32Q96QS1 320 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 SLITRK2Q9H156 845 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 NRIP3Q9NQ35 241 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 CYSLTR2Q9NS75 346 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 LANCL2Q9NS86 450 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 MRPS17Q9Y2R5 130 aaKnown RBP7.91□□□□□ -1.14
UBE3B-208ENST00000538070 FREM2Q5SZK8 3169 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 TTC28Q96AY4 2481 aa7.91□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF879B4DU55 563 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 GLCEO94923 617 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 YES1P07947 543 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 HLA-DOBP13765 273 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 ABCD3P28288 659 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 ADAM8P78325 824 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 SKP2Q13309 424 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 INPP5JQ15735 1006 aaPredicted RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 RPL22L1Q6P5R6 122 aaKnown RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 SYNPRQ8TBG9 265 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 ACOT12Q8WYK0 555 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 JSRP1Q96MG2 331 aaPredicted RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 SLC46A1Q96NT5 459 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 DUSP15Q9H1R2 295 aaPredicted RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 ELOVL3Q9HB03 270 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 MOV10Q9HCE1 1003 aaKnown RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 LOC100509620A0A075B734 347 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 A0A0A6YYJ9 748 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 A0A1W2PR77 199 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 DCDC2BA2VCK2 349 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 RLN1P04808 185 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 TMIGD3P0DMS9 266 aaPredicted RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 PNMTP11086 282 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 SSTR2P30874 369 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 DDOSTP39656 456 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 FMODQ06828 376 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 TOMM20Q15388 145 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 ACKR1Q16570 336 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 MESTQ5EB52 335 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 TMEM69Q5SWH9 247 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms