RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SLC25A4P12235 298 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 CLN3Q13286 438 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 GAB1Q13480 694 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 ELAVL1Q15717 326 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 PRAMEF17Q5VTA0 474 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 LYSMD4Q5XG99 296 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 FRG2Q64ET8 278 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 REEP3Q6NUK4 255 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 UNQ6126/PRO20091Q6UXV3 157 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 IQCHQ86VS3 1027 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 FOXRED2Q8IWF2 684 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 ABHD4Q8TB40 342 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 NUDCD2Q8WVJ2 157 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 XAGE5Q8WWM1 108 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 IGSF8Q969P0 613 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 PTCHD1Q96NR3 888 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 FRG2BQ96QU4 278 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 OR51I1Q9H343 314 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 OSER1Q9NX31 292 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 TAS2R8Q9NYW2 309 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 RLFQ13129 1914 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 GOLGA4Q13439 2230 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 TMEM229AB2RXF0 380 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 RTCAO00442 366 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 ACKR3P25106 362 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 GPR1P46091 355 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 GSK3AP49840 483 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 CAV2P51636 162 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 SRSF3P84103 164 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 BEND2Q8NDZ0 799 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 DUSP19Q8WTR2 217 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 LINC00597Q9H2U6 94 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 ASCL3Q9NQ33 180 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC2A4RGQ9NR83 387 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 TRBV23OR9-2A0A075B6M9 112 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 A0A0D9SEW6 157 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF726A6NNF4 738 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 VSIG10L2P0DP72 767 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 AHRP35869 848 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ADH7P40394 386 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 RAB1AP62820 205 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 DMWDQ09019 674 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ACSM3Q53FZ2 586 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ATPAF1Q5TC12 328 aaPredicted RBP10□□□□□ -0.81
CLSTN3-207ENST00000537408 PEG10Q86TG7 708 aaKnown RBP10□□□□□ -0.81
CLSTN3-207ENST00000537408 C1orf210Q8IVY1 113 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 FAM24BQ8N5W8 94 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 TRAM1L1Q8N609 369 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF283Q8N7M2 679 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 OR10J5Q8NHC4 309 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 PRO3102Q9H379 93 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 GXYLT2A0PJZ3 443 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 MAGEB4O15481 346 aaPredicted RBP10□□□□□ -0.81
CLSTN3-207ENST00000537408 OR12D1P0DN82 309 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 CD79AP11912 226 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 CASRP41180 1078 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 TNFRSF4P43489 277 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC6A11P48066 632 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC26A5P58743 744 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 CDK5Q00535 292 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 MEF2AQ02078 507 aaPredicted RBP10□□□□□ -0.81
CLSTN3-207ENST00000537408 NKPD1Q17RQ9 610 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 RAB41Q5JT25 222 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF385CQ66K41 422 aaPredicted RBP10□□□□□ -0.81
CLSTN3-207ENST00000537408 LRRC70Q7Z2Q7 622 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 C1QL4Q86Z23 238 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 BAP18Q8IXM2 172 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 CDK20Q8IZL9 346 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 CMTM4Q8IZR5 234 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 TCTN2Q96GX1 697 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 LHX6Q9UPM6 363 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 C1orf226A1L170 272 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ACOD1A6NK06 481 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 PMS2P2O95744 297 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ADH1BP00325 375 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 CATP04040 527 aaKnown RBP10□□□□□ -0.81
CLSTN3-207ENST00000537408 MAOAP21397 527 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 BLKP51451 505 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF674Q2M3X9 581 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 FAAP20Q6NZ36 180 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 CD163Q86VB7 1156 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 OR4K5Q8NGD3 323 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ISOC2Q96AB3 205 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 ADAM19Q9H013 955 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 SLITRK2Q9H156 845 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 VPS29Q9UBQ0 182 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 WIF1Q9Y5W5 379 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 GBF1Q92538 1859 aa10□□□□□ -0.81
CLSTN3-207ENST00000537408 URB1O60287 2271 aaKnown RBP10□□□□□ -0.81
CLSTN3-207ENST00000537408 PRAMEF25A6NGN4 478 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 M0R143 59 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 RNASET2O00584 256 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 PHOX2AO14813 284 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 VNN2O95498 520 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 PRAMEF12O95522 483 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ANXA4P09525 319 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 CSF1P09603 554 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 OR8G3PP0DMU2 310 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 ARAFP10398 606 aa9.99□□□□□ -0.81
CLSTN3-207ENST00000537408 CNTN1Q12860 1018 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms