RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 FKBP2P26885 142 aaKnown RBP12.3□□□□□ -0.44
SMG6-203ENST00000536871 APEX1P27695 318 aaKnown RBP12.3□□□□□ -0.44
SMG6-203ENST00000536871 SHC1P29353 583 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 ACVR1BP36896 505 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 RAP1BP61224 184 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 RPL27P61353 136 aaKnown RBP12.3□□□□□ -0.44
SMG6-203ENST00000536871 RAP1AP62834 184 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 IL18Q14116 193 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 ZNF684Q5T5D7 378 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 Q7L0L9 218 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 CDC20BQ86Y33 519 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 ADGRG3Q86Y34 549 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 TIGD4Q8IY51 512 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 Q8N402 240 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 EID2Q8N6I1 236 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 SPERTQ8NA61 448 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 DUSP19Q8WTR2 217 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 CRB3Q9BUF7 120 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 TXNIPQ9H3M7 391 aa12.3□□□□□ -0.44
SMG6-203ENST00000536871 ZNF346Q9UL40 294 aaKnown RBP12.3□□□□□ -0.44
SMG6-203ENST00000536871 KNL1Q8NG31 2342 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 IGLV3-32A0A0A0MS00 114 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 TRBV11-1A0A0K0K1C0 115 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 ETV2O00321 342 aaPredicted RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 F13BP05160 661 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 PRKAR1AP10644 381 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 PRKCAP17252 672 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 NPR2P20594 1047 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 NR4A2P43354 598 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 INPP1P49441 399 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 PITPNAQ00169 270 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 C19orf57Q0VDD7 668 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 ZP4Q12836 540 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 COL28A1Q2UY09 1125 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 HSD17B12Q53GQ0 312 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 MESTQ5EB52 335 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 C1orf210Q8IVY1 113 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 DEFB123Q8N688 67 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 OR51L1Q8NGJ5 315 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 MFSD8Q8NHS3 518 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 HGDQ93099 445 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 ADAD1Q96M93 576 aaKnown RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 SPSB2Q99619 263 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 PTDSS2Q9BVG9 487 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 DIABLOQ9NR28 239 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 TAS2R5Q9NYW4 299 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 GPN3Q9UHW5 284 aaPredicted RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 LAMP5Q9UJQ1 280 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 ADAMTS20P59510 1910 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 UNC80Q8N2C7 3258 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 A0A1W2PRG6 482 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 TMEM72A0PK05 275 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 MEN1O00255 615 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 KHNYNO15037 678 aaKnown RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 ITGA10O75578 1167 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 KLK3P07288 261 aaPredicted RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 AZGP1P25311 298 aaKnown RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 CRABP1P29762 137 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 CCKBRP32239 447 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 CAV3P56539 151 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 AGAP6Q5VW22 663 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 DNM1P34Q6PK57 102 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 ZNF517Q6ZMY9 492 aaPredicted RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 NRARPQ7Z6K4 114 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 SLC38A9Q8NBW4 561 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 DDIT4LQ96D03 193 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 AGAP4Q96P64 663 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 INTS14Q96SY0 518 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 KCNJ15Q99712 375 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 POTEKPQ9BYX7 375 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 RTN4RQ9BZR6 473 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 SLITRK2Q9H156 845 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 SACM1LQ9NTJ5 587 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 VSX1Q9NZR4 365 aaPredicted RBP12.29□□□□□ -0.44
SMG6-203ENST00000536871 GON4LQ3T8J9 2241 aa12.29□□□□□ -0.44
SMG6-203ENST00000536871 PCDH15Q96QU1 1955 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 PRSS37A4D1T9 235 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 D6RAR5 112 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 NTN3O00634 580 aaPredicted RBP12.28□□□□□ -0.44
SMG6-203ENST00000536871 SERPINI2O75830 405 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 RAF1P04049 648 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 DAP3P51398 398 aaKnown RBP12.28□□□□□ -0.44
SMG6-203ENST00000536871 OR2B6P58173 313 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 GNG2P59768 71 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 RASGEF1BQ0VAM2 473 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 SF3A2Q15428 464 aaKnown RBP12.28□□□□□ -0.44
SMG6-203ENST00000536871 TOMM34Q15785 309 aaPredicted RBP12.28□□□□□ -0.44
SMG6-203ENST00000536871 GXYLT1Q4G148 440 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 SLC25A53Q5H9E4 307 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 PHF19Q5T6S3 580 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 PYHIN1Q6K0P9 492 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 SLC23A3Q6PIS1 610 aa12.28□□□□□ -0.44
SMG6-203ENST00000536871 DND1Q8IYX4 353 aaKnown RBP12.28□□□□□ -0.44
SMG6-203ENST00000536871 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms