RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 USF1P22415 310 aaPredicted RBP11.45□□□□□ -0.58
MRPS35-202ENST00000536569 PPOXP50336 477 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 CDH12P55289 794 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 IL1RL1Q01638 556 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 PUDPQ08623 228 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 PMS2P3Q13401 168 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 ADIPOQQ15848 244 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 CHRFAM7AQ494W8 412 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 C6orf52Q5T4I8 152 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 NHLRC1Q6VVB1 395 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 LINC00114Q6XXX2 140 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 PATL1Q86TB9 770 aaKnown RBP11.45□□□□□ -0.58
MRPS35-202ENST00000536569 PTOV1Q86YD1 416 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 C20orf196Q8IYI0 205 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 ZNF540Q8NDQ6 660 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 SPATA3Q8NHX4 192 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 RASSF5Q8WWW0 418 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 ARHGDIGQ99819 225 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 ZNF385DQ9H6B1 395 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 KAT8Q9H7Z6 458 aaKnown RBP11.45□□□□□ -0.58
MRPS35-202ENST00000536569 CDC42EP3Q9UKI2 254 aa11.45□□□□□ -0.58
MRPS35-202ENST00000536569 ALPK2Q86TB3 2170 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 LOC390937A0A1W2PQ73 354 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 VWC2LB2RUY7 222 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 PLPP3O14495 311 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 CHP2O43745 196 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 GPRIN2O60269 458 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 ENTPD5O75356 428 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 ERCC1P07992 297 aaPredicted RBP11.44□□□□□ -0.58
MRPS35-202ENST00000536569 OR4A8P0C604 315 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 AQP1P29972 269 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 CYP51A1Q16850 503 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 INTS11Q5TA45 600 aaKnown RBP11.44□□□□□ -0.58
MRPS35-202ENST00000536569 CYB5R2Q6BCY4 276 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 CXXC5Q7LFL8 322 aaKnown RBP11.44□□□□□ -0.58
MRPS35-202ENST00000536569 SLC46A3Q7Z3Q1 461 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 LSRQ86X29 649 aaPredicted RBP11.44□□□□□ -0.58
MRPS35-202ENST00000536569 RNF217Q8TC41 542 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 MPP4Q96JB8 637 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 MCHR1Q99705 422 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 MDFIQ99750 246 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 PIMREGQ9BSJ6 248 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 PRR14Q9BWN1 585 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 SLC19A3Q9BZV2 496 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 RAB1BQ9H0U4 201 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 PCDHAC1Q9H158 963 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 ARGLU1Q9NWB6 273 aaPredicted RBP11.44□□□□□ -0.58
MRPS35-202ENST00000536569 LPAR3Q9UBY5 353 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 FBXL3Q9UKT7 428 aa11.44□□□□□ -0.58
MRPS35-202ENST00000536569 SONP18583 2426 aaKnown RBP11.44□□□□□ -0.58
MRPS35-202ENST00000536569 ARFGEF3Q5TH69 2177 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 IGHV2OR16-5A0A0B4J2B6 119 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 SLC35F4A4IF30 521 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 ZNF726A6NNF4 738 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 M0QX08 132 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 EDF1O60869 148 aaKnown RBP11.43□□□□□ -0.58
MRPS35-202ENST00000536569 HPRP00739 348 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 NPR2P20594 1047 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 CALCRP30988 508 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 PCGF2P35227 344 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 GZMKP49863 264 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 IDH3GP51553 393 aaPredicted RBP11.43□□□□□ -0.58
MRPS35-202ENST00000536569 TUBA1BP68363 451 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 TUBA4AP68366 448 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 LSM11P83369 360 aaKnown RBP eCLIP11.43□□□□□ -0.58
MRPS35-202ENST00000536569 POU3F1Q03052 451 aaPredicted RBP11.43□□□□□ -0.58
MRPS35-202ENST00000536569 HGFACQ04756 655 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 ZP4Q12836 540 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 NFYCQ13952 458 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 DUSP7Q16829 419 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 TUBA1AQ71U36 451 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 SMYD1Q8NB12 490 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 OR5J2Q8NH18 312 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 NANOS1Q8WY41 292 aaKnown RBP11.43□□□□□ -0.58
MRPS35-202ENST00000536569 HTRA1Q92743 480 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 ZNF837Q96EG3 531 aaPredicted RBP11.43□□□□□ -0.58
MRPS35-202ENST00000536569 MOGAT1Q96PD6 335 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 SORCS2Q96PQ0 1159 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 SH3GL1Q99961 368 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 B3GNT2Q9NY97 397 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 POFUT2Q9Y2G5 429 aa11.43□□□□□ -0.58
MRPS35-202ENST00000536569 M0R3G1 203 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 OR6A2O95222 327 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 NPPAP01160 153 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 FAM157CP0CG43 387 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 HLA-DOBP13765 273 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 CBLP22681 906 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 NR4A2P43354 598 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 EVX1P49640 407 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 MTPNP58546 118 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 CYLC2Q14093 348 aaPredicted RBP11.42□□□□□ -0.58
MRPS35-202ENST00000536569 GSG1Q2KHT4 349 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 COQ5Q5HYK3 327 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 ENTPD8Q5MY95 495 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 TTC33Q6PID6 262 aaPredicted RBP11.42□□□□□ -0.58
MRPS35-202ENST00000536569 CCDC80Q76M96 950 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 MDP1Q86V88 176 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 RETREG3Q86VR2 466 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 C10orf53Q8N6V4 93 aa11.42□□□□□ -0.58
MRPS35-202ENST00000536569 OR6T1Q8NGN1 323 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms