RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 SARGQ9BW04 601 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 DPH1Q9BZG8 443 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 SLC6A17Q9H1V8 727 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 OR51V1Q9H2C8 321 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 CDCP1Q9H5V8 836 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 MED20Q9H944 212 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 SLC6A20Q9NP91 592 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 PURGQ9UJV8 347 aaKnown RBP7.13□□□□□ -1.27
CPSF7-216ENST00000536548 CYP8B1Q9UNU6 501 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 FLVCR2Q9UPI3 526 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 AK6Q9Y3D8 172 aaKnown RBP7.13□□□□□ -1.27
CPSF7-216ENST00000536548 WDR45Q9Y484 360 aa7.13□□□□□ -1.27
CPSF7-216ENST00000536548 CACNA1DQ01668 2161 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 FXYD6-FXYD2A0A087WZ82 144 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 TRBV2A0A0J9YWF9 115 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 LRIT2A6NDA9 550 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 H7BY64 318 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 DNASE2O00115 360 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 CDC42EP2O14613 210 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 TNFSF14O43557 240 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 SIGLEC6O43699 453 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 SELENOFO60613 162 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PTP4A3O75365 173 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 RBBP9O75884 186 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 FGF19O95750 216 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 AK1P00568 194 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 APOC3P02656 99 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PRNPP04156 253 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MRPL3P09001 348 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 F3P13726 295 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 GABRG2P18507 467 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 POU3F2P20265 443 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 TBXA2RP21731 343 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 HIST1H1TP22492 207 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 ATP5A1P25705 553 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 DDX6P26196 483 aaKnown RBP eCLIP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 TEAD1P28347 426 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MC3RP41968 323 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 P2RX1P51575 399 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 TMPRSS3P57727 454 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 ST8SIA6P61647 398 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 CSNK1G2P78368 415 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MRPS21P82921 87 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MAT1AQ00266 395 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 SSBP1Q04837 148 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 GGTLC2Q14390 218 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 RTP5Q14D33 572 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 IRF4Q15306 451 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 ZMYND11Q15326 602 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 CEBPEQ15744 281 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 GAB4Q2WGN9 574 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 ARHGAP11BQ3KRB8 267 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 LINC00303Q3SY05 128 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 AMZ1Q400G9 498 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PABPC1L2AQ5JQF8 200 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 SLC35D3Q5M8T2 416 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PDSS1Q5T2R2 415 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 ZNF660Q6AZW8 331 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MFSD12Q6NUT3 480 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 FAM199XQ6PEV8 388 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 ZNF836Q6ZNA1 936 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 FRRS1Q6ZNA5 592 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PGAP1Q75T13 922 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PARS2Q7L3T8 475 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 C11orf96Q7Z7L8 435 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 HMGN2P46Q86SG4 172 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 ADIPOR2Q86V24 386 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 TMPRSS12Q86WS5 348 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 SLC35F2Q8IXU6 374 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 SLC35F3Q8IY50 421 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 IZUMO1Q8IYV9 350 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 CCDC116Q8IYX3 515 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 C17orf47Q8NEP4 570 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 OR2L5Q8NG80 312 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 OR4D9Q8NGE8 314 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 OR1S1Q8NH92 325 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 LILRB1Q8NHL6 650 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 WFIKKN2Q8TEU8 576 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 KLK6Q92876 244 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MARC2Q969Z3 335 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 HAVCR1Q96D42 359 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MRPS24Q96EL2 167 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PHYHIPLQ96FC7 376 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 C16orf58Q96GQ5 468 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 RBM18Q96H35 190 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PRAP1Q96NZ9 151 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 PRSS27Q9BQR3 290 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 ZNF559Q9BR84 538 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 UQCC2Q9BRT2 126 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 NKX6-2Q9C056 277 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MFFQ9GZY8 342 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 FXYD6Q9H0Q3 95 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 QRSL1Q9H0R6 528 aaKnown RBP7.12□□□□□ -1.27
CPSF7-216ENST00000536548 TMEM27Q9HBJ8 222 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 CA10Q9NS85 328 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 NTMQ9P121 344 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 MBD2Q9UBB5 411 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 IL20RAQ9UHF4 553 aa7.12□□□□□ -1.27
CPSF7-216ENST00000536548 OPN4Q9UHM6 478 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms