RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 NANSQ9NR45 359 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 MAN2C1Q9NTJ4 1040 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 BEX4Q9NWD9 120 aaPredicted RBP11.52□□□□□ -0.57
PRKDC-206ENST00000536429 FAM53CQ9NYF3 392 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 TAGLN3Q9UI15 199 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 EDARQ9UNE0 448 aa11.52□□□□□ -0.57
PRKDC-206ENST00000536429 RAI1Q7Z5J4 1906 aaPredicted RBP11.51□□□□□ -0.57
PRKDC-206ENST00000536429 OR6C65A6NJZ3 312 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 M0R3G1 203 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 SEC14L2O76054 403 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 OR7A10O76100 309 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 PRSS23O95084 383 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 MT-ND1P03886 318 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 SOD3P08294 240 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 UMPSP11172 480 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 IFNGR1P15260 489 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 TCN1P20061 433 aaPredicted RBP11.51□□□□□ -0.57
PRKDC-206ENST00000536429 CD40P25942 277 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 MSX2P35548 267 aaPredicted RBP11.51□□□□□ -0.57
PRKDC-206ENST00000536429 ADAM8P78325 824 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 ARF1P84077 181 aaKnown RBP11.51□□□□□ -0.57
PRKDC-206ENST00000536429 TGFBR3Q03167 851 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 CAMK2DQ13557 499 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 MELKQ14680 651 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 CEACAM16Q2WEN9 425 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 IFI44LQ53G44 452 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 HMBOX1Q6NT76 420 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 B3GLCTQ6Y288 498 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 PXKQ7Z7A4 578 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 C17orf78Q8N4C9 275 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 FITM2Q8N6M3 262 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 FAM86B1Q8N7N1 296 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 ZNF611Q8N823 705 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 GEMIN6Q8WXD5 167 aaKnown RBP11.51□□□□□ -0.57
PRKDC-206ENST00000536429 LZICQ8WZA0 190 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 POLR2J2Q9GZM3 115 aaKnown RBP11.51□□□□□ -0.57
PRKDC-206ENST00000536429 POLR2J3Q9H1A7 115 aaKnown RBP11.51□□□□□ -0.57
PRKDC-206ENST00000536429 CRLF2Q9HC73 371 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 ZNF229Q9UJW7 825 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 NOX1Q9Y5S8 564 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 ARID1AO14497 2285 aa11.51□□□□□ -0.57
PRKDC-206ENST00000536429 ZNF503-AS2A6NEH8 195 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 RPL36A-HNRNPH2H7BZ11 118 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 SMPD2O60906 423 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 DCTN3O75935 186 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 IFNW1P05000 195 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 DANCRP0C864 163 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 HOXC12P31275 282 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 RBM34P42696 430 aaKnown RBP11.5□□□□□ -0.57
PRKDC-206ENST00000536429 CDH11P55287 796 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 BIDP55957 195 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 ZP4Q12836 540 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 PGGHGQ32M88 737 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 GLYATQ6IB77 296 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 ABHD12BQ7Z5M8 362 aaPredicted RBP11.5□□□□□ -0.57
PRKDC-206ENST00000536429 GPR137CQ8N3F9 429 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 ANKS4BQ8N8V4 417 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 PIK3C3Q8NEB9 887 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 MOSPD2Q8NHP6 518 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 PIGTQ969N2 578 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 SGTBQ96EQ0 304 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 PERPQ96FX8 193 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 BOD1Q96IK1 185 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 PIP5K1AQ99755 562 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 SEC61A2Q9H9S3 476 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 LAMP3Q9UQV4 416 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 AMDHD2Q9Y303 409 aa11.5□□□□□ -0.57
PRKDC-206ENST00000536429 MAGED1Q9Y5V3 778 aaPredicted RBP11.5□□□□□ -0.57
PRKDC-206ENST00000536429 FLNAP21333 2647 aaKnown RBP11.49□□□□□ -0.57
PRKDC-206ENST00000536429 E7EQL1 145 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 BLOC1S5-TXNDC5H3BN57 136 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 NDUFAB1O14561 156 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 RNF13O43567 381 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 AKAP8O43823 692 aaKnown RBP11.49□□□□□ -0.57
PRKDC-206ENST00000536429 OR6A2O95222 327 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 FAM107AO95990 144 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 F13BP05160 661 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 THRBP10828 461 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 MAKP20794 623 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 AQP2P41181 271 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 PRPS1P60891 318 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 RUNX1T1Q06455 604 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 RPL18Q07020 188 aaKnown RBP11.49□□□□□ -0.57
PRKDC-206ENST00000536429 ANKRD16Q6P6B7 361 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 KLHL17Q6TDP4 642 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 TMEM108Q6UXF1 575 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 FKBP9P1Q75LS8 142 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 SLC35D2Q76EJ3 337 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 SSX8Q7RTT4 187 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 NANOGNBQ7Z5D8 188 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 MYPOPQ86VE0 399 aaPredicted RBP11.49□□□□□ -0.57
PRKDC-206ENST00000536429 TGIF2LYQ8IUE0 185 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 OFCC1Q8IZS5 231 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 PGAM4Q8N0Y7 254 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 ANKK1Q8NFD2 765 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 SMAP2Q8WU79 429 aaPredicted RBP11.49□□□□□ -0.57
PRKDC-206ENST00000536429 FBXW5Q969U6 566 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 CDRT15Q96T59 188 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 TMUB1Q9BVT8 246 aa11.49□□□□□ -0.57
PRKDC-206ENST00000536429 CD300AQ9UGN4 299 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms