RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 LEF1Q9UJU2 399 aaPredicted RBP11.41□□□□□ -0.58
RTN3-207ENST00000536011 CUBNO60494 3623 aa11.41□□□□□ -0.58
RTN3-207ENST00000536011 FBN3Q75N90 2809 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 IGKV1D-42A0A075B6H8 117 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 TRBV5-3A0A0A0MS03 114 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 A0A0B4J2E0 115 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 A0A1B0GX12 115 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 ANGPT2O15123 496 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 TRAF3IP2O43734 574 aaPredicted RBP11.4□□□□□ -0.58
RTN3-207ENST00000536011 FMO6PO60774 539 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 ENTPD5O75356 428 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 MT-ATP6P00846 226 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 C8BP07358 591 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 AQP1P29972 269 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 NR4A2P43354 598 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 IDH3GP51553 393 aaPredicted RBP11.4□□□□□ -0.58
RTN3-207ENST00000536011 TUBA1BP68363 451 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 TUBA4AP68366 448 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 POU3F1Q03052 451 aaPredicted RBP11.4□□□□□ -0.58
RTN3-207ENST00000536011 PUDPQ08623 228 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 RBBP4Q09028 425 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 PMS2P3Q13401 168 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 OR1Q1Q15612 314 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 CARTPTQ16568 116 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 MST1LQ2TV78 715 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 VHLLQ6RSH7 139 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 TUBA1AQ71U36 451 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 DHDDSQ86SQ9 333 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 LSRQ86X29 649 aaPredicted RBP11.4□□□□□ -0.58
RTN3-207ENST00000536011 SLC30A8Q8IWU4 369 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 C10orf53Q8N6V4 93 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 SLC41A3Q96GZ6 507 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 SORCS2Q96PQ0 1159 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 CPPED1Q9BRF8 314 aaPredicted RBP11.4□□□□□ -0.58
RTN3-207ENST00000536011 NELFAQ9H3P2 528 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 PLK3Q9H4B4 646 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 INTS9Q9NV88 658 aaKnown RBP11.4□□□□□ -0.58
RTN3-207ENST00000536011 MRPL39Q9NYK5 338 aaKnown RBP11.4□□□□□ -0.58
RTN3-207ENST00000536011 SEC14L4Q9UDX3 406 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 FBXL3Q9UKT7 428 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 SPEF1Q9Y4P9 236 aa11.4□□□□□ -0.58
RTN3-207ENST00000536011 ZNF726A6NNF4 738 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 RNF212BA8MTL3 300 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 HMGB1P1B2RPK0 211 aaPredicted RBP11.39□□□□□ -0.59
RTN3-207ENST00000536011 M0R3G1 203 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 TPST1O60507 370 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 OR6A2O95222 327 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 NPR2P20594 1047 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 HNF1AP20823 631 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 CBLP22681 906 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 NPRL3Q12980 569 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 GGTLC2Q14390 218 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 GLIPR1L2Q4G1C9 344 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 ARFGEF3Q5TH69 2177 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 ZNF613Q6PF04 617 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 PXKQ7Z7A4 578 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 C20orf196Q8IYI0 205 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 OR6N1Q8NGY5 312 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 TMEM158Q8WZ71 300 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 SIKE1Q9BRV8 207 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 SHARPINQ9H0F6 387 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 IKZF5Q9H5V7 419 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 DENND2DQ9H6A0 471 aaPredicted RBP11.39□□□□□ -0.59
RTN3-207ENST00000536011 DYNLRB1Q9NP97 96 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 SLC52A3Q9NQ40 469 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 POFUT2Q9Y2G5 429 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 NDUFAF1Q9Y375 327 aa11.39□□□□□ -0.59
RTN3-207ENST00000536011 IGHV2OR16-5A0A0B4J2B6 119 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 VWC2LB2RUY7 222 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 hCG_2039718K7EN88 272 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 CHP2O43745 196 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 LY6HO94772 140 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 MFN2O95140 757 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 BGLAPP02818 100 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 IGHV4-31P0DP07 118 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 APEHP13798 732 aaKnown RBP11.38□□□□□ -0.59
RTN3-207ENST00000536011 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
RTN3-207ENST00000536011 CALCRP30988 508 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 LSP1P33241 339 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 CDH12P55289 794 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 PRSS12P56730 875 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 DAG1Q14118 895 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 ADRM1Q16186 407 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 GSG1Q2KHT4 349 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 IQCCQ4KMZ1 466 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 INTS11Q5TA45 600 aaKnown RBP11.38□□□□□ -0.59
RTN3-207ENST00000536011 CARD17Q5XLA6 110 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 DLEU7Q6UYE1 221 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 ZNF813Q6ZN06 617 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 ZNF627Q7L945 461 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 PATL1Q86TB9 770 aaKnown RBP11.38□□□□□ -0.59
RTN3-207ENST00000536011 MDP1Q86V88 176 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 COMTD1Q86VU5 262 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 C10orf111Q8N326 155 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 DPP10Q8N608 796 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 TSPEARQ8WU66 669 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 NEU4Q8WWR8 484 aaPredicted RBP11.38□□□□□ -0.59
RTN3-207ENST00000536011 RASSF5Q8WWW0 418 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms