RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 APH1AQ96BI3 265 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 HRH4Q9H3N8 390 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 PRELID3BQ9Y3B1 194 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 TNFSF8P32971 234 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 BCL6P41182 706 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 RPS27AP62979 156 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 UBA52P62987 128 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 Q499Y3 187 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 BEX5Q5H9J7 111 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 ZNF546Q86UE3 836 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 CXorf36Q9H7Y0 433 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 DLG5Q8TDM6 1919 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 SPINT2O43291 252 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 SNRPBP14678 240 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 KIR2DL3P43628 341 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 KIAA1024LP59773 190 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 SLC48A1Q6P1K1 146 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 ELF4Q99607 663 aaPredicted RBP16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 GLIPR2Q9H4G4 154 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 GPATCH2Q9NW75 528 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 CLEC3BP05452 202 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 TMEM11P17152 192 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 SYT9Q86SS6 491 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 SLC22A24Q8N4F4 322 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 ZNF436Q9C0F3 470 aaPredicted RBP16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 NAV1Q8NEY1 1877 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 H7C1Q1 480 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 FBXO24O75426 580 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 SNRNP70P08621 437 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 CLDN12P56749 244 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 RBMS2Q15434 407 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 PARM1Q6UWI2 310 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 CD300LGQ6UXG3 332 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 TMEM106AQ96A25 262 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 EGLN1Q9GZT9 426 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 SEMA4GQ9NTN9 838 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 MEIOCA2RUB1 952 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 CLDN1O95832 211 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 ZNF728P0DKX0 622 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 T-ENOLP0DO92 83 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 SLC1A3P43003 542 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 GSK3AP49840 483 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 Q6ZPB1 254 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 IDO2Q6ZQW0 420 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 ELSPBP1Q96BH3 223 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 KIR3DX1Q9H7L2 352 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 A4GALTQ9NPC4 353 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 FAM166BA8MTA8 275 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 OMGP23515 440 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 HBG1P69891 147 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 HBG2P69892 147 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 SRPXP78539 464 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 SORDQ00796 357 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 DNAJC5GQ8N7S2 189 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 ZNF740Q8NDX6 193 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 TIMD4Q96H15 378 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 CSNK1G2P78368 415 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 FOXK2Q01167 660 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 MC2RQ01718 297 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 PLA2G7Q13093 441 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 NXNL2Q5VZ03 156 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 VRK3Q8IV63 474 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 BSCL2Q96G97 398 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 OR2M2Q96R28 347 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 DEFA4P12838 97 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 GHSRQ92847 366 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 HRASLS5Q96KN8 279 aa16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 TXNL4BQ9NX01 149 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-203ENST00000535236 EPHA5P54756 1037 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 MRPS34P82930 218 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 SMN1Q16637 294 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 ABHD17CQ6PCB6 329 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 GDPD3Q7L5L3 318 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 KANSL1Q7Z3B3 1105 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 ZFP82Q8N141 532 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 TMEM255BQ8WV15 326 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 LIPHQ8WWY8 451 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 KCTD12Q96CX2 325 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 PDXPQ96GD0 296 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 ZNF582Q96NG8 517 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 ABHD6Q9BV23 337 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 GRPP07492 148 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 RPS19BP1Q86WX3 136 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 PARP16Q8N5Y8 322 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 GIMAP1Q8WWP7 306 aa16.77■□□□□ 0.28
SFSWAP-203ENST00000535236 NFYBP25208 207 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 RPS25P62851 125 aaKnown RBP16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 ACSM1Q08AH1 577 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 EDDM3AQ14507 147 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 B3GLCTQ6Y288 498 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 GDF7Q7Z4P5 450 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 OR2T11Q8NH01 316 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 IFI44Q8TCB0 444 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 CCDC74AQ96AQ1 378 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 NEURL3Q96EH8 262 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 ZNF486Q96H40 463 aaPredicted RBP16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 SYT11Q9BT88 431 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 SYT5O00445 386 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 ABLIM3O94929 683 aa16.77■□□□□ 0.27
SFSWAP-203ENST00000535236 CR2P20023 1033 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms