RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 NANOGNBQ7Z5D8 188 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 TSEN54Q7Z6J9 526 aaKnown RBP11.34□□□□□ -0.59
CCS-209ENST00000534763 CCDC36Q8IYA8 594 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 C20orf196Q8IYI0 205 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 GPR137CQ8N3F9 429 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 LRRC17Q8N6Y2 441 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 FAM156AQ8NDB6 213 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 OR6X1Q8NH79 312 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 PFN4Q8NHR9 129 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 BPIFA2Q96DR5 249 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 NSMCE2Q96MF7 247 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 FOXC2Q99958 501 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 NMNAT1Q9HAN9 279 aaPredicted RBP11.34□□□□□ -0.59
CCS-209ENST00000534763 NDUFAF4Q9P032 175 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 ACTR3BQ9P1U1 418 aa11.34□□□□□ -0.59
CCS-209ENST00000534763 FAM32AQ9Y421 112 aaKnown RBP11.34□□□□□ -0.59
CCS-209ENST00000534763 ARPC4-TTLL3A0A0A6YYG9 625 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 SLC35F4A4IF30 521 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 J3KTA2 159 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 RNF13O43567 381 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 ATE1O95260 518 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 WNT11O96014 354 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 SEMG1P04279 462 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 CD3EP07766 207 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 UMPSP11172 480 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 PTNP21246 168 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 PTAFRP25105 342 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 HOXC12P31275 282 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 SLC9A3P48764 834 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 FOXG1P55316 489 aaPredicted RBP11.33□□□□□ -0.6
CCS-209ENST00000534763 PRPS1P60891 318 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 ROR2Q01974 943 aaKnown RBP11.33□□□□□ -0.6
CCS-209ENST00000534763 PRKCDQ05655 676 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 ACKR1Q16570 336 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 C3orf36Q3SXR2 165 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 KLHL17Q6TDP4 642 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 TMEM108Q6UXF1 575 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 ZNF704Q6ZNC4 412 aaPredicted RBP11.33□□□□□ -0.6
CCS-209ENST00000534763 ZNF627Q7L945 461 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 LINGO2Q7L985 606 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 HDDC2Q7Z4H3 204 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 WDR31Q8NA23 367 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 OR1K1Q8NGR3 316 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 SLC25A44Q96H78 314 aaPredicted RBP11.33□□□□□ -0.6
CCS-209ENST00000534763 DHRS1Q96LJ7 313 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 ALKBH3Q96Q83 286 aaPredicted RBP11.33□□□□□ -0.6
CCS-209ENST00000534763 PIP5K1AQ99755 562 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 CXXC4Q9H2H0 198 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 B3GAT2Q9NPZ5 323 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 C20orf141Q9NUB4 165 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 STX18Q9P2W9 335 aaKnown RBP11.33□□□□□ -0.6
CCS-209ENST00000534763 MGAT4BQ9UQ53 548 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 HIF3AQ9Y2N7 669 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 RNF115Q9Y4L5 304 aa11.33□□□□□ -0.6
CCS-209ENST00000534763 A0A087WUU8 490 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 DPRXA6NFQ7 191 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 BLOC1S5-TXNDC5H3BN57 136 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 H1F0P07305 194 aaKnown RBP11.32□□□□□ -0.6
CCS-209ENST00000534763 IFNGR1P15260 489 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 YAP1P46937 504 aaKnown RBP11.32□□□□□ -0.6
CCS-209ENST00000534763 DAP3P51398 398 aaKnown RBP11.32□□□□□ -0.6
CCS-209ENST00000534763 IST1P53990 364 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 SMIM11AP58511 58 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 RPS4XP62701 263 aaKnown RBP11.32□□□□□ -0.6
CCS-209ENST00000534763 RPL18Q07020 188 aaKnown RBP11.32□□□□□ -0.6
CCS-209ENST00000534763 BSPH1Q075Z2 132 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 KEAP1Q14145 624 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 TRIM25Q14258 630 aaKnown RBP11.32□□□□□ -0.6
CCS-209ENST00000534763 TAF11Q15544 211 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 TESK1Q15569 626 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 IQCCQ4KMZ1 466 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 KLHL24Q6TFL4 600 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 SPNS3Q6ZMD2 512 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 TMPRSS11FQ6ZWK6 438 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 SLC35D2Q76EJ3 337 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 CDK20Q8IZL9 346 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 OR52N5Q8NH56 324 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 SLC7A13Q8TCU3 470 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 NRGNQ92686 78 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 BCL2L2Q92843 193 aaPredicted RBP11.32□□□□□ -0.6
CCS-209ENST00000534763 PIGTQ969N2 578 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 MCUR1Q96AQ8 359 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 TXNDC15Q96J42 360 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 ALPK1Q96QP1 1244 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 SEPHS2Q99611 448 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 LIME1Q9H400 295 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 CRLF2Q9HC73 371 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 GPR35Q9HC97 309 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 IL1RAPQ9NPH3 570 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 BEX4Q9NWD9 120 aaPredicted RBP11.32□□□□□ -0.6
CCS-209ENST00000534763 MED29Q9NX70 200 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 TAS2R1Q9NYW7 299 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 TMEM5Q9Y2B1 443 aa11.32□□□□□ -0.6
CCS-209ENST00000534763 OTOGQ6ZRI0 2925 aa11.31□□□□□ -0.6
CCS-209ENST00000534763 A0A1W2PRG6 482 aa11.31□□□□□ -0.6
CCS-209ENST00000534763 ZNF99A8MXY4 864 aaPredicted RBP11.31□□□□□ -0.6
CCS-209ENST00000534763 C11orf98E9PRG8 122 aa11.31□□□□□ -0.6
CCS-209ENST00000534763 HS3ST1O14792 307 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms