RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 PIMREGQ9BSJ6 248 aa7.34□□□□□ -1.23
RPUSD4-209ENST00000534393 KATNB1Q9BVA0 655 aa7.34□□□□□ -1.23
RPUSD4-209ENST00000534393 TRIM15Q9C019 465 aa7.34□□□□□ -1.23
RPUSD4-209ENST00000534393 KAT8Q9H7Z6 458 aaKnown RBP7.34□□□□□ -1.23
RPUSD4-209ENST00000534393 THUMPD1Q9NXG2 353 aaKnown RBP7.34□□□□□ -1.23
RPUSD4-209ENST00000534393 P2RX2Q9UBL9 471 aa7.34□□□□□ -1.23
RPUSD4-209ENST00000534393 USP22Q9UPT9 525 aa7.34□□□□□ -1.23
RPUSD4-209ENST00000534393 CORO2BQ9UQ03 480 aa7.34□□□□□ -1.23
RPUSD4-209ENST00000534393 LOC390937A0A1W2PQ73 354 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ELOVL7A1L3X0 281 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ZC3H12DA2A288 527 aaKnown RBP7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 CDHR4A6H8M9 788 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 LIPT2A6NK58 231 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 AQP7P3A6NL99 342 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 B9A039 149 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ZNF587BE7ETH6 402 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ATP6V1G2-DDX39BF2Z307 99 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 AKR7A3O95154 331 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ATP6V1G2O95670 118 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ERCC1P07992 297 aaPredicted RBP7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 CHRM4P08173 479 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 NCK1P16333 377 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 GPX2P18283 190 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 CDH2P19022 906 aaPredicted RBP7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 SERPINF1P36955 418 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 CRATP43155 626 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 CRISP3P54108 245 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 FOXG1P55316 489 aaPredicted RBP7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 PLAURQ03405 335 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 OR7A5Q15622 319 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 SWI5Q1ZZU3 235 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 LIN52Q52LA3 116 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 RNF220Q5VTB9 566 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 C9orf135Q5VTT2 229 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 GLYATQ6IB77 296 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 FAM166AQ6J272 317 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 HMGN2P46Q86SG4 172 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 SERPINA11Q86U17 422 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 GPAT4Q86UL3 456 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 CALHM3Q86XJ0 350 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 TMEM99Q8N816 258 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 FAM169BQ8N8A8 192 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ANKK1Q8NFD2 765 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 OR52P1PQ8NH57 321 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 MAGEE2Q8TD90 523 aaPredicted RBP7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 FBXO17Q96EF6 278 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 MUC13Q9H3R2 512 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 RAD21L1Q9H4I0 556 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 CA10Q9NS85 328 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ACTR3BQ9P1U1 418 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 KCNS2Q9ULS6 477 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 MOKQ9UQ07 419 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 RASD1Q9Y272 281 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 SNX13Q9Y5W8 968 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
RPUSD4-209ENST00000534393 ARPC4-TTLL3A0A0A6YYG9 625 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 A0A0G2JPF8 293 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 FAM220BPB1ANY3 271 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 HNRNPCL2B2RXH8 293 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 HNRNPCL3B7ZW38 293 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 CXCR6O00574 342 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 ARPC2O15144 300 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 FKBP6O75344 327 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 KRT36O76013 467 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 BAG2O95816 211 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 TFPTP0C1Z6 253 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 HNRNPCL4P0DMR1 293 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 IGHV4-31P0DP07 118 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 SRD5A1P18405 259 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 GTF2E2P29084 291 aaKnown RBP7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 NR4A2P43354 598 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 GZMMP51124 257 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 RGNQ15493 299 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 EFNB3Q15768 340 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 MST1LQ2TV78 715 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 TBRG1Q3YBR2 411 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 COX20Q5RI15 118 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 C1orf140Q5VVS0 124 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 PRAMEF8Q5VWM4 474 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 PRAMEF7Q5VXH5 474 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 ERICH5Q6P6B1 374 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 ANKRD16Q6P6B7 361 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 UGT2A3Q6UWM9 527 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 C5orf46Q6UWT4 87 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 CREB3L2Q70SY1 520 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 SLC46A3Q7Z3Q1 461 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 CCDC36Q8IYA8 594 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 MICU2Q8IYU8 434 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 C10orf111Q8N326 155 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 CADM2Q8N3J6 435 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 ZIC4Q8N9L1 334 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 IL17RDQ8NFM7 739 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 OR4F15Q8NGB8 312 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 OR1K1Q8NGR3 316 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 MFSD8Q8NHS3 518 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 STK35Q8TDR2 534 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 PYDC1Q8WXC3 89 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 NANOS1Q8WY41 292 aaKnown RBP7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 HTRA1Q92743 480 aa7.32□□□□□ -1.24
RPUSD4-209ENST00000534393 SLC35B4Q969S0 331 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms