RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 ASPNQ9BXN1 380 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 CACNG6Q9BXT2 260 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 FKRPQ9H9S5 495 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 MED4Q9NPJ6 270 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 POU2F3Q9UKI9 436 aa12.25□□□□□ -0.45
SF3B2-215ENST00000534307 A0A096LPE4 126 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 A0A1W2PPZ6 126 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 CPSF4LA6NMK7 179 aaKnown RBP12.24□□□□□ -0.45
SF3B2-215ENST00000534307 PLPP3O14495 311 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 MRASO14807 208 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 MT-ATP6P00846 226 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 IGKV3-15P01624 115 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 VIMP08670 466 aaKnown RBP12.24□□□□□ -0.45
SF3B2-215ENST00000534307 ARF1P84077 181 aaKnown RBP12.24□□□□□ -0.45
SF3B2-215ENST00000534307 PUDPQ08623 228 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 SF3A3Q12874 501 aaKnown RBP eCLIP12.24□□□□□ -0.45
SF3B2-215ENST00000534307 PMS2P3Q13401 168 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 C1DQ13901 141 aaKnown RBP12.24□□□□□ -0.45
SF3B2-215ENST00000534307 VEZF1Q14119 521 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 PXKQ7Z7A4 578 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 SNX32Q86XE0 403 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 UEVLDQ8IX04 471 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 C20orf196Q8IYI0 205 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 PIK3C3Q8NEB9 887 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 VANGL1Q8TAA9 524 aaPredicted RBP12.24□□□□□ -0.45
SF3B2-215ENST00000534307 RNF217Q8TC41 542 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 C10orf82Q8WW14 230 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 RASSF5Q8WWW0 418 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 LRR1Q96L50 414 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF583Q96ND8 569 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 PRSS27Q9BQR3 290 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 KATNB1Q9BVA0 655 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 BARX1Q9HBU1 254 aaPredicted RBP12.24□□□□□ -0.45
SF3B2-215ENST00000534307 CRLF2Q9HC73 371 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 USP22Q9UPT9 525 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 MOKQ9UQ07 419 aa12.24□□□□□ -0.45
SF3B2-215ENST00000534307 ARFGEF3Q5TH69 2177 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 TRAPPC13A5PLN9 417 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF503-AS2A6NEH8 195 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF99A8MXY4 864 aaPredicted RBP12.23□□□□□ -0.45
SF3B2-215ENST00000534307 H7C417 338 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 SLC22A2O15244 555 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 AKAP8O43823 692 aaKnown RBP12.23□□□□□ -0.45
SF3B2-215ENST00000534307 CECR9P0C854 216 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 NQO1P15559 274 aaKnown RBP12.23□□□□□ -0.45
SF3B2-215ENST00000534307 FABP6P51161 128 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 UBE2NP61088 152 aaKnown RBP12.23□□□□□ -0.45
SF3B2-215ENST00000534307 TUBA1BP68363 451 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 TUBA4AP68366 448 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 POU3F1Q03052 451 aaPredicted RBP12.23□□□□□ -0.45
SF3B2-215ENST00000534307 MAPRE2Q15555 327 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF74Q16587 644 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 MST1LQ2TV78 715 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 CEACAM16Q2WEN9 425 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 HSP90B2PQ58FF3 399 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 TUBA1AQ71U36 451 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 FBXL14Q8N1E6 418 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 GPR137CQ8N3F9 429 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 OR5J2Q8NH18 312 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 TXNDC15Q96J42 360 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 MPP4Q96JB8 637 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 HS6ST2Q96MM7 605 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 EMC6Q9BV81 110 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 SLC19A3Q9BZV2 496 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 SEC61A2Q9H9S3 476 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 MOV10Q9HCE1 1003 aaKnown RBP12.23□□□□□ -0.45
SF3B2-215ENST00000534307 MED29Q9NX70 200 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 SLC7A7Q9UM01 511 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 NOX1Q9Y5S8 564 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 ATP23Q9Y6H3 246 aa12.23□□□□□ -0.45
SF3B2-215ENST00000534307 A0A096LNT2 108 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 LOC100653049A0A140TA62 436 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 SLC35F4A4IF30 521 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 KRT34O76011 436 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 APOBEC3AP31941 199 aaPredicted RBP12.22□□□□□ -0.45
SF3B2-215ENST00000534307 IL1RL1Q01638 556 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 NAAAQ02083 359 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 SWI5Q1ZZU3 235 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 MMEL1Q495T6 779 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 ZNF627Q7L945 461 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 MYPOPQ86VE0 399 aaPredicted RBP12.22□□□□□ -0.45
SF3B2-215ENST00000534307 ADAD1Q96M93 576 aaKnown RBP12.22□□□□□ -0.45
SF3B2-215ENST00000534307 ECSITQ9BQ95 431 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 REG4Q9BYZ8 158 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 TAS2R5Q9NYW4 299 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 CAPN7Q9Y6W3 813 aa12.22□□□□□ -0.45
SF3B2-215ENST00000534307 ABCA1O95477 2261 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 FAM220BPB1ANY3 271 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 M0R3G1 203 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 CELA3BP08861 270 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 ASAH2BP0C7U1 165 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 CBR1P16152 277 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 TNFRSF1BP20333 461 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 CALCRP30988 508 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 MDH1P40925 334 aaKnown RBP12.21□□□□□ -0.45
SF3B2-215ENST00000534307 PPP2R2BQ00005 443 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 ZP4Q12836 540 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 CAMK2DQ13557 499 aa12.21□□□□□ -0.45
SF3B2-215ENST00000534307 CARD17Q5XLA6 110 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms