RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 DEPDC4Q8N2C3 294 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 LRRC17Q8N6Y2 441 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 BCAS4Q8TDM0 211 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 MUS81Q96NY9 551 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 CCL19Q99731 98 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 EMC6Q9BV81 110 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 MEPEQ9NQ76 525 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-227ENST00000533909 SLC17A5Q9NRA2 495 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 DCAF13Q9NV06 445 aaKnown RBP11.76□□□□□ -0.53
CAPN1-227ENST00000533909 MED29Q9NX70 200 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 FAM53CQ9NYF3 392 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 A4GNTQ9UNA3 340 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 SNX13Q9Y5W8 968 aa11.76□□□□□ -0.53
CAPN1-227ENST00000533909 A0A1W2PPR1 153 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 A0A1W2PRG6 482 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 SLC35F4A4IF30 521 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 HTR3EA5X5Y0 456 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 J3KTA2 159 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 OR7A10O76100 309 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 ATE1O95260 518 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 STAMBPO95630 424 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 SAGP10523 405 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-227ENST00000533909 HLA-DOBP13765 273 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 IFNGR1P15260 489 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 ITGA2P17301 1181 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 MSX2P35548 267 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-227ENST00000533909 CAPZA2P47755 286 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 CSNK1A1P48729 337 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 BIDP55957 195 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 CAMK2DQ13557 499 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 HIKESHIQ53FT3 197 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 FGD3Q5JSP0 725 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 C1QTNF12Q5T7M4 302 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 ANKRD16Q6P6B7 361 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 HDDC2Q7Z4H3 204 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 PIAS4Q8N2W9 510 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-227ENST00000533909 RBM15BQ8NDT2 890 aaKnown RBP11.75□□□□□ -0.53
CAPN1-227ENST00000533909 OR1K1Q8NGR3 316 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 AKAP1Q92667 903 aaKnown RBP eCLIP11.75□□□□□ -0.53
CAPN1-227ENST00000533909 PIGTQ969N2 578 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 BPIFA2Q96DR5 249 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 TXNDC15Q96J42 360 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 ADAD1Q96M93 576 aaKnown RBP11.75□□□□□ -0.53
CAPN1-227ENST00000533909 C1QTNF6Q9BXI9 259 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 ULBP2Q9BZM5 246 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 NDEL1Q9GZM8 345 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 GORASP2Q9H8Y8 452 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 CRLF2Q9HC73 371 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 POU2F3Q9UKI9 436 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 MGAT4BQ9UQ53 548 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 ENPP4Q9Y6X5 453 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 CSMD2Q7Z408 3487 aa11.75□□□□□ -0.53
CAPN1-227ENST00000533909 PRR14LQ5THK1 2151 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 A0A096LPE4 126 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 A0A1W2PPZ6 126 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 hCG_2039718K7EN88 272 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ABCD4O14678 606 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 HS3ST1O14792 307 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ARPC2O15144 300 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 PIP5K1CO60331 668 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ZNF432O94892 652 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 BCL10O95999 233 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 IGF2P01344 180 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 H1F0P07305 194 aaKnown RBP11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ASAH2BP0C7U1 165 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 PTAFRP25105 342 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 DAP3P51398 398 aaKnown RBP11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ARF1P84077 181 aaKnown RBP11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ZP4Q12836 540 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 TAF11Q15544 211 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 CEACAM16Q2WEN9 425 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 TBRG1Q3YBR2 411 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ADAM5Q6NVV9 412 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 SLC22A25Q6T423 547 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 SLC46A3Q7Z3Q1 461 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 NRMQ8IXM6 262 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 C20orf196Q8IYI0 205 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 TMEM123Q8N131 208 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ARHGAP24Q8N264 748 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ZNF566Q969W8 418 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 PYURFQ96I23 114 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 RADILQ96JH8 1075 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 KCNS3Q9BQ31 491 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 GPR35Q9HC97 309 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 MOV10Q9HCE1 1003 aaKnown RBP11.74□□□□□ -0.53
CAPN1-227ENST00000533909 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 KRCC1Q9NPI7 259 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-227ENST00000533909 C20orf141Q9NUB4 165 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 TAS2R5Q9NYW4 299 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 POFUT2Q9Y2G5 429 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
CAPN1-227ENST00000533909 ITPR3Q14573 2671 aa11.73□□□□□ -0.53
CAPN1-227ENST00000533909 DPRXA6NFQ7 191 aa11.73□□□□□ -0.53
CAPN1-227ENST00000533909 EFCAB9A8MZ26 197 aa11.73□□□□□ -0.53
CAPN1-227ENST00000533909 RPL36A-HNRNPH2H7BZ11 118 aa11.73□□□□□ -0.53
CAPN1-227ENST00000533909 SMPD2O60906 423 aa11.73□□□□□ -0.53
CAPN1-227ENST00000533909 PLAUP00749 431 aa11.73□□□□□ -0.53
CAPN1-227ENST00000533909 IGHG1P01857 330 aa11.73□□□□□ -0.53
CAPN1-227ENST00000533909 RHCEP18577 417 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms