RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CALYQ9NYX4 217 aa1.46□□□□□ -2.18
BRCA2-205ENST00000533776 RPAP1Q9BWH6 1393 aaPredicted RBP1.46□□□□□ -2.18
BRCA2-205ENST00000533776 NFASCO94856 1347 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 CIB4A0PJX0 185 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 BICDL2A1A5D9 508 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 MBLAC1A4D2B0 266 aaPredicted RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 K7EQM0 130 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 HSD17B6O14756 317 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 ARPC3O15145 178 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 TOM1O60784 492 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 PEX11AO75192 247 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 HEXBP07686 556 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 RHOXF2BP0C7M4 288 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 IQCF3P0C7M6 154 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 TLX1NBP0CAT3 122 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 GKN3PP0CG01 181 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 HSPA5P11021 654 aaKnown RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 PSMA5P28066 241 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 CCR1P32246 355 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 SOX6P35712 828 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 ACAA2P42765 397 aaKnown RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 HMGCS1Q01581 520 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 ENPEPQ07075 957 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 OR5I1Q13606 314 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 GNMTQ14749 295 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 ABCA11PQ4W5N1 156 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 CCDC92Q53HC0 331 aaPredicted RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 COA6Q5JTJ3 125 aaKnown RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 CNIH2Q6PI25 160 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 LYPD2Q6UXB3 125 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 PLA2G4DQ86XP0 818 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 FGF14Q92915 247 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 EXOSC8Q96B26 276 aaKnown RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 LRRC58Q96CX6 371 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 CXorf40BQ96DE9 158 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 AURKBQ96GD4 344 aaPredicted RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 SLC38A2Q96QD8 506 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF607Q96SK3 696 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 ECSITQ9BQ95 431 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 RIBC2Q9H4K1 309 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 RANBP3Q9H6Z4 567 aaPredicted RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF430Q9H8G1 570 aaPredicted RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 CTPS2Q9NRF8 586 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 BFARQ9NZS9 450 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 SPATA7Q9P0W8 599 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 XCL2Q9UBD3 114 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 KCNIP3Q9Y2W7 256 aa1.45□□□□□ -2.18
BRCA2-205ENST00000533776 YTHDF2Q9Y5A9 579 aaKnown RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 F11RQ9Y624 299 aaKnown RBP1.45□□□□□ -2.18
BRCA2-205ENST00000533776 FANCIQ9NVI1 1328 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 IGLV3-22A0A075B6J6 115 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 OR5B21A6NL26 309 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 H3BNH8 94 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 XKRYO14609 159 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 B4GALT5O43286 388 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 RAMP3O60896 148 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 KRT8P05787 483 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 IGHV3-43DP0DP04 118 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 NCK1P16333 377 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 SLC2A5P22732 501 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 C5orf47Q569G3 176 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 NANOGP8Q6NSW7 305 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 LINC00173Q6ZV60 143 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 GET4Q7L5D6 327 aaPredicted RBP1.44□□□□□ -2.18
BRCA2-205ENST00000533776 VSTM4Q8IW00 320 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 PIANPQ8IYJ0 282 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 ZADH2Q8N4Q0 377 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF615Q8N8J6 731 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 FAM133AQ8N9E0 248 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 MFSD9Q8NBP5 474 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 VN1R2Q8NFZ6 395 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 SYNPRQ8TBG9 265 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 CD300LFQ8TDQ1 290 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 SMARCD2Q92925 531 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 SPIN2AQ99865 258 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 SPIN2BQ9BPZ2 258 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 RIOK1Q9BRS2 568 aaKnown RBP1.44□□□□□ -2.18
BRCA2-205ENST00000533776 NDFIP1Q9BT67 221 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 YY1AP1Q9H869 796 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 LY9Q9HBG7 655 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 NOX3Q9HBY0 568 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 SLC40A1Q9NP59 571 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 POLE4Q9NR33 117 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 SMOXQ9NWM0 555 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF629Q9UEG4 869 aaPredicted RBP1.44□□□□□ -2.18
BRCA2-205ENST00000533776 OR12D3Q9UGF7 316 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 OPN4Q9UHM6 478 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF222Q9UK12 451 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 SNX6Q9UNH7 406 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 AP1M2Q9Y6Q5 423 aa1.44□□□□□ -2.18
BRCA2-205ENST00000533776 CCDC182A6NF36 153 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 COLCA2A8K830 154 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 PRKAB2O43741 272 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 SCGNO76038 276 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 BGLAPP02818 100 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 PGAM1P18669 254 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 GYG1P46976 350 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 NCBP2P52298 156 aaKnown RBP eCLIP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 ERVK-25P63136 954 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms