RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CHI3L2Q15782 390 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 NKPD1Q17RQ9 610 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 CFAP157Q5JU67 520 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 C1orf140Q5VVS0 124 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 OR4F3Q6IEY1 312 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 ZCCHC23Q6ZST2 131 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 CCDC36Q8IYA8 594 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 GPR137CQ8N3F9 429 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 ANKFN1Q8N957 763 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 GLB1L3Q8NCI6 653 aaPredicted RBP10.4□□□□□ -0.74
SVIP-205ENST00000533774 ITPKCQ96DU7 683 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 CCDC126Q96EE4 140 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 KTI12Q96EK9 354 aaPredicted RBP10.4□□□□□ -0.74
SVIP-205ENST00000533774 OR2M2Q96R28 347 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 GAL3ST1Q99999 423 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 PTDSS2Q9BVG9 487 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 TAPBPLQ9BX59 468 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 SLC38A1Q9H2H9 487 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 ATAD3AQ9NVI7 634 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 RLIMQ9NVW2 624 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 PURGQ9UJV8 347 aaKnown RBP10.4□□□□□ -0.74
SVIP-205ENST00000533774 RCE1Q9Y256 329 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 AUP1Q9Y679 476 aa10.4□□□□□ -0.74
SVIP-205ENST00000533774 COL7A1Q02388 2944 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 IGLV3-9A0A075B6K5 115 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 PPIAL4EA0A075B759 164 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 PPIAL4CA0A0B4J2A2 164 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 EXOC1LA0A1B0GW35 172 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 A0A1W2PPM1 405 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 FAM181BA6NEQ2 426 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 CFAP73A6NFT4 308 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 AGAP5A6NIR3 686 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 A8MVM7 634 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 TMEM114B3SHH9 223 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 CLDN25C9JDP6 229 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 PPIAL4DF5H284 164 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 M0R3G1 203 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 PLIN3O60664 434 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 TFPTP0C1Z6 253 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 PATE4P0C8F1 98 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 PPIAL4FP0DN26 164 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 ZNF12P17014 697 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 MAKP20794 623 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 RPS4Y1P22090 263 aaKnown RBP10.39□□□□□ -0.75
SVIP-205ENST00000533774 ECHS1P30084 290 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 GIPRP48546 466 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 NAA20P61599 178 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 SEC61A1P61619 476 aaKnown RBP10.39□□□□□ -0.75
SVIP-205ENST00000533774 RPS23P62266 143 aaKnown RBP10.39□□□□□ -0.75
SVIP-205ENST00000533774 SYPL1Q16563 259 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 GPAT3Q53EU6 434 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 SPRNQ5BIV9 151 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 TMEM255AQ5JRV8 349 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 MRPL2Q5T653 305 aaKnown RBP10.39□□□□□ -0.75
SVIP-205ENST00000533774 IL23RQ5VWK5 629 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 OLFML2AQ68BL7 652 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 C17orf107Q6ZR85 190 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 DDIASQ8IXT1 998 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 TWIST2Q8WVJ9 160 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 PRPF18Q99633 342 aaKnown RBP10.39□□□□□ -0.75
SVIP-205ENST00000533774 GATA5Q9BWX5 397 aaPredicted RBP10.39□□□□□ -0.75
SVIP-205ENST00000533774 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 NKIRAS2Q9NYR9 191 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 UBAP1Q9NZ09 502 aa10.39□□□□□ -0.75
SVIP-205ENST00000533774 A0A087WUV0 522 aaPredicted RBP10.38□□□□□ -0.75
SVIP-205ENST00000533774 HMGN4O00479 90 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 CHRNGP07510 517 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 FAM157BP0CG42 384 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 PRG2P13727 222 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 B4GALT1P15291 398 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 ZNF250P15622 560 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 ZNF43P17038 809 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 RAG2P55895 527 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 RAB1AP62820 205 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 GALK2Q01415 458 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 EGR4Q05215 589 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 TSTQ16762 297 aaKnown RBP10.38□□□□□ -0.75
SVIP-205ENST00000533774 PGS1Q32NB8 556 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 BEAN1Q3B7T3 259 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 XKR7Q5GH72 579 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 C6orf136Q5SQH8 315 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 ATAD3BQ5T9A4 648 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 CARD17Q5XLA6 110 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 RGS7BPQ6MZT1 257 aaPredicted RBP10.38□□□□□ -0.75
SVIP-205ENST00000533774 TMEM154Q6P9G4 183 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 ZNF813Q6ZN06 617 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 ZNF627Q7L945 461 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 CMIPQ8IY22 773 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 NATD1Q8N6N6 113 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 ACMSDQ8TDX5 336 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 RAB1CQ92928 201 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 SLC25A36Q96CQ1 311 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 OXGR1Q96P68 337 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 OR51B6Q9H340 312 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 C1RLQ9NZP8 487 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 INSIG2Q9Y5U4 225 aa10.38□□□□□ -0.75
SVIP-205ENST00000533774 TET2Q6N021 2002 aaPredicted RBP10.38□□□□□ -0.75
SVIP-205ENST00000533774 TIMM23O14925 209 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 HOXA3O43365 443 aaPredicted RBP10.37□□□□□ -0.75
SVIP-205ENST00000533774 LYPLA1O75608 230 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms