RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MAGEA5P43359 124 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 VBP1P61758 197 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 PMP22Q01453 160 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 GTPBP8Q8N3Z3 284 aaPredicted RBP16.63■□□□□ 0.25
SMPD1-208ENST00000533123 TMEM251Q8N6I4 163 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 NANOGP1Q8N7R0 232 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 MND1Q9BWT6 205 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 FN3KQ9H479 309 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 FGF20Q9NP95 211 aaPredicted RBP16.63■□□□□ 0.25
SMPD1-208ENST00000533123 H2AFY2Q9P0M6 372 aaPredicted RBP16.63■□□□□ 0.25
SMPD1-208ENST00000533123 BAIAP2Q9UQB8 552 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF407Q9C0G0 2248 aa16.63■□□□□ 0.25
SMPD1-208ENST00000533123 OR2M5A3KFT3 312 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 H3BML4 177 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 GLSO94925 669 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 OCM2P0CE71 109 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 OCMP0CE72 109 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 HIST1H1CP16403 213 aaKnown RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 GADD45AP24522 165 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ADH6P28332 368 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 AQP2P41181 271 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 RGS6P49758 472 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 NCS1P62166 190 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ITGADQ13349 1161 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 TSTQ16762 297 aaKnown RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 KLHL12Q53G59 568 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 WIPI1Q5MNZ9 446 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ARHGAP11AQ6P4F7 1023 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 CENPSQ8N2Z9 138 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 RBMXL3Q8N7X1 1067 aaKnown RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 SLC37A3Q8NCC5 494 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 OR52E2Q8NGJ4 325 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 OR4K13Q8NH42 304 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 NDNFQ8TB73 568 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 OPALINQ96PE5 141 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 PRR23D1E9PI22 279 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 MYL12BO14950 172 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ASAH2BP0C7U1 165 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 PRR23D2P0DMB1 279 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF3P17036 446 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 CD79BP40259 229 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 PPIAP62937 165 aaKnown RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ERVK-25P63136 954 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF169Q14929 603 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 TMEM44Q2T9K0 475 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 RNFT1Q5M7Z0 435 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 C16orf87Q6PH81 154 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ZBTB46Q86UZ6 589 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 SDR9C7Q8NEX9 313 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 CHPT1Q8WUD6 406 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 KISS1RQ969F8 398 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 OR51V1Q9H2C8 321 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 PALMDQ9NP74 551 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 ZNF71Q9NQZ8 489 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 PAIP2BQ9ULR5 123 aaKnown RBP16.62■□□□□ 0.25
SMPD1-208ENST00000533123 PCDHGB7Q9Y5F8 929 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 PKD1L2Q7Z442 2459 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 DNAJC13O75165 2243 aa16.62■□□□□ 0.25
SMPD1-208ENST00000533123 A8MVM7 634 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 IGF2P01344 180 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 GYPBP06028 91 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 MYL12AP19105 171 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 SPHARQ15513 63 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 LINC00303Q3SY05 128 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 OR2G6Q5TZ20 316 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 RNLSQ5VYX0 342 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 DPY19L2P2Q6ZN68 376 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 Q6ZS92 163 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 GID4Q8IVV7 300 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 GHDCQ8N2G8 530 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 SLC43A2Q8N370 569 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 LIPHQ8WWY8 451 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 PIGQQ9BRB3 760 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 ARHGAP9Q9BRR9 750 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 KATNB1Q9BVA0 655 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 SERINC1Q9NRX5 453 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 INIPQ9NRY2 104 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 HIF3AQ9Y2N7 669 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 CORINQ9Y5Q5 1042 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 TLN1Q9Y490 2541 aaKnown RBP16.61■□□□□ 0.25
SMPD1-208ENST00000533123 IMPA2O14732 288 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 NPIPB7O75200 414 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 SLC16A1P53985 500 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 B3GALT5-AS1P59052 145 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 SSX1Q16384 188 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 HYAL4Q2M3T9 481 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 SOWAHCQ53LP3 525 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-208ENST00000533123 ASB18Q6ZVZ8 466 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 MEPCEQ7L2J0 689 aaKnown RBP16.61■□□□□ 0.25
SMPD1-208ENST00000533123 PROKR2Q8NFJ6 384 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 OR51G2Q8NGK0 314 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 OR9Q1Q8NGQ5 310 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 RASD2Q96D21 266 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 ARL5BQ96KC2 179 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 PTDSS2Q9BVG9 487 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 NRIP3Q9NQ35 241 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 SEC14L4Q9UDX3 406 aa16.61■□□□□ 0.25
SMPD1-208ENST00000533123 IRGMA1A4Y4 181 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 CCDC182A6NF36 153 aa16.6■□□□□ 0.25
SMPD1-208ENST00000533123 J3QRK9 145 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms