RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 OCLNQ16625 522 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 TMEM225Q6GV28 225 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 UGT2A3Q6UWM9 527 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 PTCHD4Q6ZW05 846 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 FCRLAQ7L513 359 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 CCDC103Q8IW40 242 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 UEVLDQ8IX04 471 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 CISD2Q8N5K1 135 aaKnown RBP13.19□□□□□ -0.3
NXF1-214ENST00000533048 TCEANCQ8N8B7 351 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 UBE2FQ969M7 185 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 ZNF566Q969W8 418 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 SNRNP40Q96DI7 357 aaKnown RBP13.19□□□□□ -0.3
NXF1-214ENST00000533048 Q96M85 177 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 DDOQ99489 341 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 TUBA1CQ9BQE3 449 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 CLCF1Q9UBD9 225 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 GRHPRQ9UBQ7 328 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 MCTS1Q9ULC4 181 aaKnown RBP13.19□□□□□ -0.3
NXF1-214ENST00000533048 SVILO95425 2214 aa13.19□□□□□ -0.3
NXF1-214ENST00000533048 ATRXP46100 2492 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 SPENQ96T58 3664 aaKnown RBP13.18□□□□□ -0.3
NXF1-214ENST00000533048 IGHV3-15A0A0B4J1V0 119 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 A6NIZ1 184 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 KDM4EB2RXH2 506 aaPredicted RBP13.18□□□□□ -0.3
NXF1-214ENST00000533048 SYNGR4O95473 234 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 SLC2A10O95528 541 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 IFNGR1P15260 489 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 HIST1H1CP16403 213 aaKnown RBP13.18□□□□□ -0.3
NXF1-214ENST00000533048 ZNF3P17036 446 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 ZNF43P17038 809 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 CXCR4P61073 352 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 RAP1BP61224 184 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 RAP1AP62834 184 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 CDK5R2Q13319 367 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 PON3Q15166 354 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 C3AR1Q16581 482 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 MESTQ5EB52 335 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 SLC35F1Q5T1Q4 408 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 AADACL4Q5VUY2 407 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 MEDAGQ5VYS4 303 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 SLC35D2Q76EJ3 337 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 HDDC2Q7Z4H3 204 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 KDM8Q8N371 416 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 NPEPL1Q8NDH3 523 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 OR9K2Q8NGE7 335 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 HDAC2Q92769 488 aaKnown RBP13.18□□□□□ -0.3
NXF1-214ENST00000533048 RASD2Q96D21 266 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 PLEKHA8Q96JA3 519 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 NR1H4Q96RI1 486 aaPredicted RBP13.18□□□□□ -0.3
NXF1-214ENST00000533048 NMNAT2Q9BZQ4 307 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 RNF122Q9H9V4 155 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 GP6Q9HCN6 339 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 HINT3Q9NQE9 182 aaKnown RBP13.18□□□□□ -0.3
NXF1-214ENST00000533048 RASSF1Q9NS23 344 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 KLHL13Q9P2N7 655 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 ING1Q9UK53 422 aaPredicted RBP13.18□□□□□ -0.3
NXF1-214ENST00000533048 ZNF346Q9UL40 294 aaKnown RBP13.18□□□□□ -0.3
NXF1-214ENST00000533048 CAMK2AQ9UQM7 478 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 GTF3C1Q12789 2109 aa13.18□□□□□ -0.3
NXF1-214ENST00000533048 SH3D21A4FU49 640 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 CLCA1A8K7I4 914 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 AHRRA9YTQ3 701 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 CENPBD1B2RD01 187 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 NPIPA2E9PIF3 369 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 NPIPA3F8WFD2 350 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 TLX2O43763 284 aaPredicted RBP13.17□□□□□ -0.3
NXF1-214ENST00000533048 AHCYL1O43865 530 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 PLGP00747 810 aaPredicted RBP13.17□□□□□ -0.3
NXF1-214ENST00000533048 FCGR2AP12318 317 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.17□□□□□ -0.3
NXF1-214ENST00000533048 ITGADQ13349 1161 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 TOP3AQ13472 1001 aaPredicted RBP13.17□□□□□ -0.3
NXF1-214ENST00000533048 CRMP1Q14194 572 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 ST3GAL2Q16842 350 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 C6orf141Q5SZD1 244 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 NXNL2Q5VZ03 156 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 CREB3L2Q70SY1 520 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 GPAT4Q86UL3 456 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 ZIC4Q8N9L1 334 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 SLC37A3Q8NCC5 494 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 OR52E2Q8NGJ4 325 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 OR6X1Q8NH79 312 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 CNIH3Q8TBE1 160 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 FNDC9Q8TBE3 224 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 LRR1Q96L50 414 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 ADAD1Q96M93 576 aaKnown RBP13.17□□□□□ -0.3
NXF1-214ENST00000533048 IL4I1Q96RQ9 567 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 YTHDF1Q9BYJ9 559 aaKnown RBP13.17□□□□□ -0.3
NXF1-214ENST00000533048 BCO1Q9HAY6 547 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 PLCXD1Q9NUJ7 323 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 RCE1Q9Y256 329 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 GPR52Q9Y2T5 361 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 FLVCR1Q9Y5Y0 555 aa13.17□□□□□ -0.3
NXF1-214ENST00000533048 TRIM64A6NGJ6 449 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 M0R3G1 203 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 AQP8O94778 261 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 BCL10O95999 233 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms