RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-225	ENST00000532409	MPP4	Q96JB8	637 aa		13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	HOPX	Q9BPY8	73 aa	Predicted RBP	13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	ALG2	Q9H553	416 aa		13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	GPR35	Q9HC97	309 aa		13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	DLL4	Q9NR61	685 aa		13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	C20orf141	Q9NUB4	165 aa		13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	TAS2R5	Q9NYW4	299 aa		13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	CISD1	Q9NZ45	108 aa	Known RBP	13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	AMDHD2	Q9Y303	409 aa		13.56	□□□□□ -0.24
CTSB-225	ENST00000532409	SLC35F4	A4IF30	521 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	ZNF503-AS2	A6NEH8	195 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409		E7EQL1	145 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409		J3KTA2	159 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	GSTA4	O15217	222 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	PIP5K1C	O60331	668 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	OR5F1	O95221	314 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	ZNF682	O95780	498 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	IFNGR1	P15260	489 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	PTAFR	P25105	342 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	CDKN1A	P38936	164 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	PRPS1	P60891	318 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	CAMK2D	Q13557	499 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	SLC22A25	Q6T423	547 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	KLHL17	Q6TDP4	642 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	KLHL24	Q6TFL4	600 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	YTHDF3	Q7Z739	585 aa	Known RBP	13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	MEX3D	Q86XN8	651 aa	Known RBP	13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	C20orf196	Q8IYI0	205 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	RNF148	Q8N7C7	305 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	CMTM5	Q96DZ9	223 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	SEC61A2	Q9H9S3	476 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	FKRP	Q9H9S5	495 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	CRLF2	Q9HC73	371 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	NANS	Q9NR45	359 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	RHCG	Q9UBD6	479 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	ABCD2	Q9UBJ2	740 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	A4GNT	Q9UNA3	340 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	NOX1	Q9Y5S8	564 aa		13.55	□□□□□ -0.24
CTSB-225	ENST00000532409	OR6C65	A6NJZ3	312 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	ATP6V1G2-DDX39B	F2Z307	99 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	SERPINA1	P01009	418 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	CD8A	P01732	235 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	ASAH2B	P0C7U1	165 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	UMPS	P11172	480 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	FUT1	P19526	365 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	BID	P55957	195 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	MELK	Q14680	651 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	SSX8	Q7RTT4	187 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	PXK	Q7Z7A4	578 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	PIGW	Q7Z7B1	504 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	LRRC75A-AS1	Q8N1F1	130 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	CIART	Q8N365	385 aa	Predicted RBP	13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	FAM156A	Q8NDB6	213 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	PIK3C3	Q8NEB9	887 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	SMR3A	Q99954	134 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	GSX2	Q9BZM3	304 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	SLC19A3	Q9BZV2	496 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	GSX1	Q9H4S2	264 aa	Predicted RBP	13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	ARL8B	Q9NVJ2	186 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	EGFL7	Q9UHF1	273 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	AP3M1	Q9Y2T2	418 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	ZFHX3	Q15911	3703 aa		13.54	□□□□□ -0.24
CTSB-225	ENST00000532409	IGHV1-18	A0A0C4DH31	117 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	TRIM64	A6NGJ6	449 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	TRIM64B	A6NI03	449 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	RPL36A-HNRNPH2	H7BZ11	118 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	FFAR1	O14842	300 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	RRP9	O43818	475 aa	Known RBP	13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	AKAP8	O43823	692 aa	Known RBP	13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	NDUFS7	O75251	213 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	OR6A2	O95222	327 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	MT-ND1	P03886	318 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	CELA3B	P08861	270 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	PRDX6	P30041	224 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	UBE2N	P61088	152 aa	Known RBP	13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	RPS4X	P62701	263 aa	Known RBP	13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	SHE	Q5VZ18	495 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	ANKRD16	Q6P6B7	361 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	CBLL1	Q75N03	491 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	SLC35D2	Q76EJ3	337 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	MYPOP	Q86VE0	399 aa	Predicted RBP	13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	TMEM239	Q8WW34	195 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	GTPBP3	Q969Y2	492 aa	Known RBP	13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	BOD1	Q96IK1	185 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	HSH2D	Q96JZ2	352 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	PRRC1	Q96M27	445 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409		Q96MF0	132 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	CXorf56	Q9H5V9	222 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	MAN2C1	Q9NTJ4	1040 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	ZNF701	Q9NV72	531 aa	Predicted RBP	13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	ADA2	Q9NZK5	511 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	ZNF229	Q9UJW7	825 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	POU2F3	Q9UKI9	436 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	MOK	Q9UQ07	419 aa		13.53	□□□□□ -0.24
CTSB-225	ENST00000532409	C2CD3	Q4AC94	2353 aa		13.52	□□□□□ -0.24
CTSB-225	ENST00000532409	ZNF726	A6NNF4	738 aa		13.52	□□□□□ -0.25
CTSB-225	ENST00000532409	BLOC1S5-TXNDC5	H3BN57	136 aa		13.52	□□□□□ -0.25
CTSB-225	ENST00000532409	OVOL3	O00110	214 aa		13.52	□□□□□ -0.25

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