RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 A0A1W2PRQ8 180 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 HTR3EA5X5Y0 456 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 DPRXA6NFQ7 191 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 OR6C65A6NJZ3 312 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 hCG_2039718K7EN88 272 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 ACOT8O14734 319 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 GMNNO75496 209 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 RAD51DO75771 328 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 PDE5AO76074 875 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 RPS4XP62701 263 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 RPL18Q07020 188 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 BNIP1Q12981 228 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 DGCR6Q14129 220 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 LAPTM4AQ15012 233 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 SEC23BQ15437 767 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 C9orf135Q5VTT2 229 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 CYP2R1Q6VVX0 501 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 MBOAT2Q6ZWT7 520 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 MEX3DQ86XN8 651 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 WFDC8Q8IUA0 241 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 NRMQ8IXM6 262 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 C20orf196Q8IYI0 205 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 RNF113BQ8IZP6 322 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 LRRC75AQ8NAA5 344 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 C1orf162Q8NEQ5 155 aaPredicted RBP12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 ANKK1Q8NFD2 765 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 MOSPD2Q8NHP6 518 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 BCL2L2Q92843 193 aaPredicted RBP12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 BPIFA2Q96DR5 249 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 PIK3IP1Q96FE7 263 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 LRR1Q96L50 414 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 IL1RAPQ9NPH3 570 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 V9GYQ6 96 aa12.23□□□□□ -0.45
TSPAN4-220ENST00000532375 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 DSCAMO60469 2012 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 TRBV4-1A0A0J9YWV2 114 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 C11orf98E9PRG8 122 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 PLAUP00749 431 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 H1F0P07305 194 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 IFI30P13284 250 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 IFNGR1P15260 489 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 ZNF26P17031 533 aaPredicted RBP12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 AHCYP23526 432 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 AQP2P41181 271 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 MAGEA2P43356 314 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 BEX5Q5H9J7 111 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 NCMAPQ5T1S8 102 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 OR7E24Q6IFN5 339 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 PODNL1Q6PEZ8 512 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 TMPRSS11FQ6ZWK6 438 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 SLC35D2Q76EJ3 337 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 PIWIL3Q7Z3Z3 882 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 LILRB1Q8NHL6 650 aaPredicted RBP12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 PLPPR2Q96GM1 343 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 ALKBH3Q96Q83 286 aaPredicted RBP12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 SEPHS2Q99611 448 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 PIP5K1AQ99755 562 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 THTPAQ9BU02 230 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 MUC13Q9H3R2 512 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 GPR35Q9HC97 309 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 SLC17A5Q9NRA2 495 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 HIF3AQ9Y2N7 669 aa12.22□□□□□ -0.45
TSPAN4-220ENST00000532375 A0A1W2PR80 420 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 CIB4A0PJX0 185 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 BLOC1S5-TXNDC5H3BN57 136 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 CDC42EP2O14613 210 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 PTP4A3O75365 173 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 SLC43A1O75387 559 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 UMPSP11172 480 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 IFNA8P32881 189 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 LIMS1P48059 325 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 ROR2Q01974 943 aaKnown RBP12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 RUNX1T1Q06455 604 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 CAMK2DQ13557 499 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 PPA1Q15181 289 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 LRFN4Q6PJG9 635 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 NANOGNBQ7Z5D8 188 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 CYP4Z1Q86W10 505 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 DHFR2Q86XF0 187 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 OR1K1Q8NGR3 316 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 OR52N5Q8NH56 324 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 OR6X1Q8NH79 312 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 TMEM54Q969K7 222 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 TNFRSF13CQ96RJ3 184 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 GPA33Q99795 319 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 BTBD10Q9BSF8 475 aa12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 MRPL13Q9BYD1 178 aaKnown RBP12.21□□□□□ -0.45
TSPAN4-220ENST00000532375 PLCE1Q9P212 2302 aa12.21□□□□□ -0.46
TSPAN4-220ENST00000532375 OTOGQ6ZRI0 2925 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF587BE7ETH6 402 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 RNF13O43567 381 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 SERPINI2O75830 405 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 OR6A2O95222 327 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 HIST1H2ABP04908 130 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 F13BP05160 661 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 OMPP47874 163 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 HMGA2P52926 109 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 BIDP55957 195 aa12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 ARF1P84077 181 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-220ENST00000532375 IL1RL1Q01638 556 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms