RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	TIPIN	Q9BVW5	301 aa		4.62	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.62	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ALG9	Q9H6U8	611 aa		4.62	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DIP2C	Q9Y2E4	1556 aa		4.62	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLC22A23	A1A5C7	686 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	C2orf74	A8MZ97	194 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PRR32	B1ATL7	298 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967		H0Y980	276 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TMEM178B	H3BS89	294 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967		K7EN84	100 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DCTN6	O00399	190 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RFPL2	O75678	378 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TOX	O94900	526 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	COMT	P21964	271 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PDX1	P52945	283 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CRISP1	P54107	249 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PSME3	P61289	254 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NTHL1	P78549	312 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	INPP5J	Q15735	1006 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CHRFAM7A	Q494W8	412 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TIGD2	Q4W5G0	525 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PPM1L	Q5SGD2	360 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TPRG1L	Q5T0D9	272 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ANKRD26P1	Q6NSI1	321 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SHC4	Q6S5L8	630 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	STOX1	Q6ZVD7	989 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PEX26	Q7Z412	305 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CNIH3	Q8TBE1	160 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CD99L2	Q8TCZ2	262 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MCOLN3	Q8TDD5	553 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CXorf40A	Q8TE69	158 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RASSF5	Q8WWW0	418 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	IRF7	Q92985	503 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RNF166	Q96A37	237 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ASB7	Q9H672	318 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ABCB9	Q9NP78	766 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZDHHC4	Q9NPG8	344 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DDX19A	Q9NUU7	478 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	BFAR	Q9NZS9	450 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SAR1B	Q9Y6B6	198 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967		A0A1W2PP64	1363 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PDS5A	Q29RF7	1337 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PSMB11	A5LHX3	300 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR5K3	A6NET4	321 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR2AT4	A6NND4	320 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PROB1	E7EW31	1015 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	hCG_2039718	K7EN88	272 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RGS16	O15492	202 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CDC14B	O60729	498 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CEACAM4	O75871	244 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MED26	O95402	600 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	FGF19	O95750	216 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SP1	P08047	785 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MGMT	P16455	207 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	XRCC1	P18887	633 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	HSPA9	P38646	679 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLCO1A2	P46721	670 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	IDH2	P48735	452 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DNASE1L1	P49184	302 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	EIF2B2	P49770	351 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MLLT10	P55197	1068 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ST3GAL3	Q11203	375 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CNPY1	Q3B7I2	92 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR52E8	Q6IFG1	317 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	S100A7A	Q86SG5	101 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RIBC1	Q8N443	379 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ATP6V0D2	Q8N8Y2	350 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LYPD6B	Q8NI32	183 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	THAP6	Q8TBB0	222 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RORB	Q92753	470 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	S100PBP	Q96BU1	408 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CCDC126	Q96EE4	140 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SGTB	Q96EQ0	304 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZNF641	Q96N77	438 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	KXD1	Q9BQD3	176 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SYT15	Q9BQS2	421 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ELOVL4	Q9GZR5	314 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ING2	Q9H160	280 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	FZD3	Q9NPG1	666 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GIN1	Q9NXP7	522 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CTNND2	Q9UQB3	1225 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	AK6	Q9Y3D8	172 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CASZ1	Q86V15	1759 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PTPRM	P28827	1452 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RFX7	Q2KHR2	1363 aa		4.61	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NKX6-3	A6NJ46	265 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	C2CD4D	B7Z1M9	353 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RHOD	O00212	210 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MAGEB4	O15481	346 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	FZD7	O75084	574 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	APOH	P02749	345 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NGFR	P08138	427 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MBL2	P11226	248 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GATA1	P15976	413 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DDOST	P39656	456 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	AP1S2	P56377	157 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZP1	P60852	638 aa		4.6	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PITX1	P78337	314 aa	Predicted RBP	4.6	□□□□□ -1.67

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