RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ARMC8Q8IUR7 673 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 CCDC36Q8IYA8 594 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 SCAIQ8N9R8 606 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 ATP6V1G3Q96LB4 118 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 CPPED1Q9BRF8 314 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-207ENST00000531727 ASPNQ9BXN1 380 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 LPAR3Q9UBY5 353 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 FBXO9Q9UK97 447 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-207ENST00000531727 MXRA5Q9NR99 2828 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 IGHV2OR16-5A0A0B4J2B6 119 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 M0R3G1 203 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 TPST2O60704 377 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 SEC14L2O76054 403 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 MFN2O95140 757 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 HLA-DOBP13765 273 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 THBS4P35443 961 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 GZMKP49863 264 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 CARTPTQ16568 116 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 RUNDC3AQ59EK9 446 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 PHYHD1Q5SRE7 291 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 SWT1Q5T5J6 900 aaKnown RBP14.58□□□□□ -0.08
CPSF1-207ENST00000531727 CARD17Q5XLA6 110 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 DLEU7Q6UYE1 221 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 MDP1Q86V88 176 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 C20orf196Q8IYI0 205 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 DYDC1Q8WWB3 177 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 LRR1Q96L50 414 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 WFDC6Q9BQY6 131 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 TMEM43Q9BTV4 400 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 EMC6Q9BV81 110 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 BEX2Q9BXY8 128 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 RAB1BQ9H0U4 201 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 MRPL39Q9NYK5 338 aaKnown RBP14.58□□□□□ -0.08
CPSF1-207ENST00000531727 USP22Q9UPT9 525 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 ANGPT4Q9Y264 503 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 NOX1Q9Y5S8 564 aa14.58□□□□□ -0.08
CPSF1-207ENST00000531727 SLC35F4A4IF30 521 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 VSTM5A8MXK1 200 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 hCG_2039718K7EN88 272 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 LMX1BO60663 402 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 NPR2P20594 1047 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 CAPZA2P47755 286 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 CDH12P55289 794 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 PCBP3P57721 371 aaKnown RBP14.57□□□□□ -0.08
CPSF1-207ENST00000531727 POU3F1Q03052 451 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-207ENST00000531727 PUDPQ08623 228 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 NPRL3Q12980 569 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 PMS2P3Q13401 168 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 TTMPQ5BVD1 217 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 NHLRC1Q6VVB1 395 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 PTOV1Q86YD1 416 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 IL17RDQ8NFM7 739 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 TMEM158Q8WZ71 300 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 ANKRD27Q96NW4 1050 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 FOXN4Q96NZ1 517 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 MOGAT1Q96PD6 335 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 RABEP2Q9H5N1 569 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 B3GAT2Q9NPZ5 323 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 B3GNT2Q9NY97 397 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 LEF1Q9UJU2 399 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-207ENST00000531727 ATRQ13535 2644 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 RTTNQ86VV8 2226 aa14.57□□□□□ -0.08
CPSF1-207ENST00000531727 COL6A5A8TX70 2615 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 IGHV4-61A0A0C4DH41 118 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 FMO6PO60774 539 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 APEHP13798 732 aaKnown RBP14.56□□□□□ -0.08
CPSF1-207ENST00000531727 RBBP4Q09028 425 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF627Q7L945 461 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 DHDDSQ86SQ9 333 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 PHC2Q8IXK0 858 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 SVOPLQ8N434 492 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 C10orf53Q8N6V4 93 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 SMYD1Q8NB12 490 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 C11orf65Q8NCR3 313 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF540Q8NDQ6 660 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 STON2Q8WXE9 905 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 TXNDC15Q96J42 360 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 DOK1Q99704 481 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 MCHR1Q99705 422 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 REPIN1Q9BWE0 567 aaKnown RBP14.56□□□□□ -0.08
CPSF1-207ENST00000531727 SHARPINQ9H0F6 387 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 NOX3Q9HBY0 568 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 MED29Q9NX70 200 aa14.56□□□□□ -0.08
CPSF1-207ENST00000531727 FBN3Q75N90 2809 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 TMEM129A0AVI4 362 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF726A6NNF4 738 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 LRRN3E7EW58 273 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 M0R3H8 397 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 PLPP3O14495 311 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 HLA-HP01893 362 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 ERCC1P07992 297 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-207ENST00000531727 SNTB2Q13425 540 aaKnown RBP14.55□□□□□ -0.08
CPSF1-207ENST00000531727 CAMK2DQ13557 499 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 DAG1Q14118 895 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 CYP51A1Q16850 503 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 GSG1Q2KHT4 349 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 IQCCQ4KMZ1 466 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 FAM166AQ6J272 317 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 ZNF613Q6PF04 617 aa14.55□□□□□ -0.08
CPSF1-207ENST00000531727 LINC00114Q6XXX2 140 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms