RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 RPL36A-HNRNPH2H7BZ11 118 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 AKAP10O43572 662 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 PIP5K1CO60331 668 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 UGT2B17O75795 530 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 CLPTM1O96005 669 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 HLA-HP01893 362 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 ZNF14P17017 642 aaPredicted RBP6.93□□□□□ -1.3
CD44-232ENST00000531118 SDC1P18827 310 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 FOXA1P55317 472 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 PKNOX1P55347 436 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 SEC61A1P61619 476 aaKnown RBP6.93□□□□□ -1.3
CD44-232ENST00000531118 GALK2Q01415 458 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 GUCY2DQ02846 1103 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 LCP2Q13094 533 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 OR7A5Q15622 319 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 GSG1Q2KHT4 349 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 CEACAM16Q2WEN9 425 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 DEFB112Q30KQ8 113 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 TRMT5Q32P41 509 aaKnown RBP6.93□□□□□ -1.3
CD44-232ENST00000531118 FAM153CQ494X1 144 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 FAM205BPQ63HN1 556 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 RGS7BPQ6MZT1 257 aaPredicted RBP6.93□□□□□ -1.3
CD44-232ENST00000531118 TMEM154Q6P9G4 183 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 EPHX4Q8IUS5 362 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 BHLHE22Q8NFJ8 381 aaPredicted RBP6.93□□□□□ -1.3
CD44-232ENST00000531118 OR52E2Q8NGJ4 325 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 CLHC1Q8NHS4 586 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 LINC01006Q8NI28 216 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 GTF3AQ92664 365 aaKnown RBP6.93□□□□□ -1.3
CD44-232ENST00000531118 ELMOD3Q96FG2 381 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 ZNF75AQ96N20 296 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 WWC2-AS2Q96NR7 200 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 OR7D2Q96RA2 312 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 SDF2Q99470 211 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 CCT7Q99832 543 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 SLC30A2Q9BRI3 323 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 ZNF350Q9GZX5 532 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 PRDM13Q9H4Q3 707 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 REEP4Q9H6H4 257 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 GPR35Q9HC97 309 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 NECAP2Q9NVZ3 263 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 SH3BP4Q9P0V3 963 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 SLC7A8Q9UHI5 535 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 OSGIN1Q9UJX0 560 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 SNX12Q9UMY4 172 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 FAF1Q9UNN5 650 aaPredicted RBP6.93□□□□□ -1.3
CD44-232ENST00000531118 SLC35A3Q9Y2D2 325 aa6.93□□□□□ -1.3
CD44-232ENST00000531118 IGLV3-9A0A075B6K5 115 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 AP3D1O14617 1153 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 TPD52L2O43399 206 aaKnown RBP6.92□□□□□ -1.3
CD44-232ENST00000531118 AK1P00568 194 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 OPN1MWP04001 364 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 GPIP06744 558 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 OPN1MW2P0DN77 364 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 OPN1MW3P0DN78 364 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 MAKP20794 623 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 HTR3AP46098 478 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 POLR2HP52434 150 aaKnown RBP6.92□□□□□ -1.3
CD44-232ENST00000531118 KLF3P57682 345 aaPredicted RBP6.92□□□□□ -1.3
CD44-232ENST00000531118 RPL15P61313 204 aaKnown RBP6.92□□□□□ -1.3
CD44-232ENST00000531118 COL10A1Q03692 680 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 GLO1Q04760 184 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 CALCOCO2Q13137 446 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 CEACAM7Q14002 265 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 MAPK14Q16539 360 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 HFEQ30201 348 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 CCBE1Q6UXH8 406 aaPredicted RBP6.92□□□□□ -1.3
CD44-232ENST00000531118 CREB3L2Q70SY1 520 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 CMIPQ8IY22 773 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 CCDC36Q8IYA8 594 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 TMEM86BQ8N661 226 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 SFXN5Q8TD22 340 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 MGARPQ8TDB4 240 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 DCAKDQ8WVC6 231 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 PPP1R14AQ96A00 147 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 UPRTQ96BW1 309 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 FCRL1Q96LA6 429 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 TSSK3Q96PN8 268 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 DPH5Q9H2P9 285 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 EXOSC3Q9NQT5 275 aaKnown RBP6.92□□□□□ -1.3
CD44-232ENST00000531118 B3GNT2Q9NY97 397 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 OR5V1Q9UGF6 321 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 MKLN1Q9UL63 735 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 RCE1Q9Y256 329 aa6.92□□□□□ -1.3
CD44-232ENST00000531118 HERC2O95714 4834 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 AGAP5A6NIR3 686 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 ZNF99A8MXY4 864 aaPredicted RBP6.91□□□□□ -1.3
CD44-232ENST00000531118 FCMRO60667 390 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 SLC43A1O75387 559 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 STX11O75558 287 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 VAMP5O95183 116 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 RAB36O95755 333 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 IGHV2-70P01814 119 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 CHRM4P08173 479 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 MYZAPP0CAP1 466 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 PPIAL4GP0DN37 164 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 CD79AP11912 226 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 TACR3P29371 465 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 LSP1P33241 339 aa6.91□□□□□ -1.3
CD44-232ENST00000531118 IDH2P48735 452 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms