RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 PXKQ7Z7A4 578 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 AMIGO2Q86SJ2 522 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 ZNF100Q8IYN0 542 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 HS3ST5Q8IZT8 346 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 LINC00471Q8N535 108 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 OR10G2Q8NGC3 310 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 GNPDA2Q8TDQ7 276 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 GIPC3Q8TF64 312 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 TMEM45BQ96B21 275 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 TXNDC15Q96J42 360 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 MCCC2Q9HCC0 563 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 KCNJ16Q9NPI9 418 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 PRSS50Q9UI38 385 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 HIF3AQ9Y2N7 669 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 NOX1Q9Y5S8 564 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 A8MXE2 369 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 MSTNO14793 375 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 PTP4A3O75365 173 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 GASTP01350 101 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 IGHV3-9P01782 118 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 FCGR1AP12314 374 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 POU2F1P14859 743 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 IFNGR1P15260 489 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 ZNF26P17031 533 aaPredicted RBP12.4□□□□□ -0.42
USF1-209ENST00000529476 FPR3P25089 353 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 GRNP28799 593 aaKnown RBP12.4□□□□□ -0.42
USF1-209ENST00000529476 OR3A2P47893 321 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 GSSP48637 474 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 SELENOPP49908 381 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 ASCL1P50553 236 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 GK3PQ14409 553 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 ZBED5Q49AG3 693 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 ALG10Q5BKT4 473 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 ZFP1Q6P2D0 407 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 NIPAL3Q6P499 406 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 ZNF474Q6S9Z5 364 aaPredicted RBP12.4□□□□□ -0.42
USF1-209ENST00000529476 IGFN1Q86VF2 1251 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 WDFY1Q8IWB7 410 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 LRRC75AQ8NAA5 344 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 AQP11Q8NBQ7 271 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 APH1AQ96BI3 265 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 S100A14Q9HCY8 104 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 INIPQ9NRY2 104 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 PARPBPQ9NWS1 579 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 MED29Q9NX70 200 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 PDP1Q9P0J1 537 aaPredicted RBP12.4□□□□□ -0.42
USF1-209ENST00000529476 SIGLEC7Q9Y286 467 aa12.4□□□□□ -0.42
USF1-209ENST00000529476 MAGED1Q9Y5V3 778 aaPredicted RBP12.4□□□□□ -0.42
USF1-209ENST00000529476 ZNF432O94892 652 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 PRKACGP22612 351 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 FXYD6P3P58550 94 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 TFF3Q07654 80 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 TSPAN31Q12999 210 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 MELKQ14680 651 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 ANKDD1AQ495B1 522 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 SHQ1Q6PI26 577 aaKnown RBP12.39□□□□□ -0.43
USF1-209ENST00000529476 SLC35D2Q76EJ3 337 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 C10orf67Q8IYJ2 551 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 GTPBP3Q969Y2 492 aaKnown RBP12.39□□□□□ -0.43
USF1-209ENST00000529476 FEVQ99581 238 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 PKP2Q99959 881 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 BDH2Q9BUT1 245 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 EMC6Q9BV81 110 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 RBM24Q9BX46 236 aaKnown RBP12.39□□□□□ -0.43
USF1-209ENST00000529476 ENKD1Q9H0I2 346 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 SEMA6AQ9H2E6 1030 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 MGAT4BQ9UQ53 548 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 OTOGQ6ZRI0 2925 aa12.39□□□□□ -0.43
USF1-209ENST00000529476 ALPK2Q86TB3 2170 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 SLC35F4A4IF30 521 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 ARRDC5A6NEK1 342 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 MCIDASD6RGH6 385 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 C19orf84I3L1E1 186 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 RPL4P36578 427 aaKnown RBP12.38□□□□□ -0.43
USF1-209ENST00000529476 BIDP55957 195 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 CTXN1P60606 82 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 PRPS1P60891 318 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 LGALS3BPQ08380 585 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 ACKR1Q16570 336 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 FBXL19-AS1Q494R0 122 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 TSPO2Q5TGU0 170 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 CARD17Q5XLA6 110 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 ANKRD34AQ69YU3 496 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 THSD4Q6ZMP0 1018 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 STK32CQ86UX6 486 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 OR5K1Q8NHB7 308 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 FANK1Q8TC84 345 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 CENPNQ96H22 339 aaPredicted RBP12.38□□□□□ -0.43
USF1-209ENST00000529476 OR2M2Q96R28 347 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 NIPSNAP1Q9BPW8 284 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 DGCR6LQ9BY27 220 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
USF1-209ENST00000529476 SLC7A10Q9NS82 523 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 GALNT8Q9NY28 637 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 IL20RAQ9UHF4 553 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 RCE1Q9Y256 329 aa12.38□□□□□ -0.43
USF1-209ENST00000529476 F8P00451 2351 aa12.37□□□□□ -0.43
USF1-209ENST00000529476 ITPR3Q14573 2671 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms